RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PCDHGA1Q9Y5H4 931 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SERPINE3A8MV23 424 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 FAM157AC9JC47 383 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 RRP8O43159 456 aaKnown RBP8.5□□□□□ -1.05
CDH13-204ENST00000539548 JTBO76095 146 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 IGLV3-1P01715 115 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 SERPINA5P05154 406 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 SFTPBP07988 381 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 PTGER4P35408 488 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 F2RL1P55085 397 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 FAM3AP98173 230 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 ZNF239Q16600 458 aaKnown RBP8.5□□□□□ -1.05
CDH13-204ENST00000539548 C1QL2Q7Z5L3 287 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 DEFB123Q8N688 67 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 STT3BQ8TCJ2 826 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 SFT2D1Q8WV19 159 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 OXGR1Q96P68 337 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 TM2D1Q9BX74 207 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 TUBD1Q9UJT1 453 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 RALGAPA1Q6GYQ0 2036 aa8.5□□□□□ -1.05
CDH13-204ENST00000539548 C9JQL5 133 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 DUX1O43812 170 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 HPNP05981 417 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 QDPRP09417 244 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 RCC1P18754 421 aaPredicted RBP8.49□□□□□ -1.05
CDH13-204ENST00000539548 THBS4P35443 961 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 RBMXP38159 391 aaKnown RBP8.49□□□□□ -1.05
CDH13-204ENST00000539548 ACY1Q03154 408 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 SMAD4Q13485 552 aaKnown RBP8.49□□□□□ -1.05
CDH13-204ENST00000539548 HMGN3Q15651 99 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 IAH1Q2TAA2 248 aaPredicted RBP8.49□□□□□ -1.05
CDH13-204ENST00000539548 OR2A2Q6IF42 318 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 OPN5Q6U736 354 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 SLC16A14Q7RTX9 510 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 KMT5CQ86Y97 462 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 C15orf54Q8N8G6 183 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 KIRREL1Q96J84 757 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 SULT4A1Q9BR01 284 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 TPSD1Q9BZJ3 242 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 FGF21Q9NSA1 209 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 DECR2Q9NUI1 292 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 KLRF1Q9NZS2 232 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 TIMM10BQ9Y5J6 103 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 IGLV3-12A0A075B6K2 115 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 LOC102725191A0A1B0GVB3 256 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 PRSS44E7EML9 344 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 K7EPK0 472 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 DEDDO75618 318 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 KNG1P01042 644 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 CTSDP07339 412 aaPredicted RBP8.49□□□□□ -1.05
CDH13-204ENST00000539548 FCGR2CP31995 323 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 CD80P33681 288 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 LTBRP36941 435 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 PTGDSP41222 190 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 FOXL2P58012 376 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 RAB5BP61020 215 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 CARD17Q5XLA6 110 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 DHRS11Q6UWP2 260 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 SGPP2Q8IWX5 399 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 FAM71E2Q8N5Q1 922 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
CDH13-204ENST00000539548 TSTD1Q8NFU3 115 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 C2CD4CQ8TF44 421 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 MAFIPQ8WZ33 124 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 PGAM5Q96HS1 289 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 SHDQ96IW2 340 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 LYZL4Q96KX0 146 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 PRRX2Q99811 253 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 ARV1Q9H2C2 271 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 AMDHD2Q9Y303 409 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 KPTNQ9Y664 436 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 EYSQ5T1H1 3165 aa8.49□□□□□ -1.05
CDH13-204ENST00000539548 A0A0U1RQV5 110 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 ZNF726A6NNF4 738 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 ZNF814B7Z6K7 855 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 E9PLN8 166 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 STMND1H3BQB6 276 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 IFNA21P01568 189 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 UCP2P55851 309 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 LSM6P62312 80 aaKnown RBP8.48□□□□□ -1.05
CDH13-204ENST00000539548 HABP2Q14520 560 aaPredicted RBP8.48□□□□□ -1.05
CDH13-204ENST00000539548 SMCO1Q147U7 214 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 RNF212Q495C1 297 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 Q6ZSR3 168 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 FAM219AQ8IW50 185 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 FOXRED2Q8IWF2 684 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 COMMD1Q8N668 190 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 UBAC2Q8NBM4 344 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 SEMA6DQ8NFY4 1073 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 OR5L2Q8NGL0 311 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 LILRB1Q8NHL6 650 aaPredicted RBP8.48□□□□□ -1.05
CDH13-204ENST00000539548 FNDC9Q8TBE3 224 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 SLC25A43Q8WUT9 341 aaPredicted RBP8.48□□□□□ -1.05
CDH13-204ENST00000539548 LIN37Q96GY3 246 aaPredicted RBP8.48□□□□□ -1.05
CDH13-204ENST00000539548 MESP1Q9BRJ9 268 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 FBXL17Q9UF56 701 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 STARD10Q9Y365 291 aa8.48□□□□□ -1.05
CDH13-204ENST00000539548 B3GALT1Q9Y5Z6 326 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms