RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MYOZ2Q9NPC6 264 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CTPS2Q9NRF8 586 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 AGPAT4Q9NRZ5 378 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RHBDL2Q9NX52 303 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC39A1Q9NY26 324 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC17A7Q9P2U7 560 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GGA2Q9UJY4 613 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 UGT2A1Q9Y4X1 527 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TSSC4Q9Y5U2 329 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 MAP3K1Q13233 1512 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 FER1L6Q2WGJ9 1857 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PARP14Q460N5 1801 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SGCEO43556 437 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CD5LO43866 347 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR7C2O60412 319 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV3-11P01762 117 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 HBE1P02100 147 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 KLK1P06870 262 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CCDC166P0CW27 439 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 HTR1EP28566 365 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SHMT2P34897 504 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TGFBR1P36897 503 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CTRLP40313 264 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RGS6P49758 472 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SUB1P53999 127 aaKnown RBP eCLIP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ATP6V0D1P61421 351 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 LSM6P62312 80 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 LOXL1Q08397 574 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PMS2P3Q13401 168 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CAPRIN1Q14444 709 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CLINT1Q14677 625 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TAF1AQ15573 450 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TNXAQ16473 311 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA7BQ2TAP0 167 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CNPY1Q3B7I2 92 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR52W1Q6IF63 320 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ACP7Q6ZNF0 438 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SNX20Q7Z614 316 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CMTM1Q8IZ96 169 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CYP4Z2PQ8N1L4 340 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CBR4Q8N4T8 237 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TTC29Q8NA56 475 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR6K6Q8NGW6 343 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR52N1Q8NH53 320 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR5K2Q8NHB8 316 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CAPSLQ8WWF8 208 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ANP32BQ92688 251 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR5B12Q96R08 314 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR8B4Q96RC9 309 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 C20orf24Q9BUV8 137 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GAL3ST2Q9H3Q3 398 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PLEKHF2Q9H8W4 249 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 NANOGQ9H9S0 305 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC17A4Q9Y2C5 497 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 KLK5Q9Y337 293 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 NUBP2Q9Y5Y2 271 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ALPK3Q96L96 1907 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PEAK1Q9H792 1746 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 DOCK5Q9H7D0 1870 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 A0A0B4J2E0 115 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 A0A0J9YXY3 114 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM120BA0PK00 339 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ZFP92A6NM28 416 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 NCBP2LA6PVI3 153 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 H7C1H1 209 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GOSR2O14653 212 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC9A3R1O14745 358 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 COCHO43405 550 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PSIP1O75475 530 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OXSR1O95747 527 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF688P0C7X2 276 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 IL1RNP18510 177 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CXCR1P25024 350 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 EVX1P49640 407 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PFN3P60673 137 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TIMM10P62072 90 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 RPS15AP62244 130 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 HMGCS1Q01581 520 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC25A11Q02978 314 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CKAP4Q07065 602 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF816Q0VGE8 651 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 MOGQ16653 247 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 AKIRIN2Q53H80 203 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CLLU1OSQ5K130 101 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GLYATQ6IB77 296 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 LRRC31Q6UY01 552 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 HSD17B13Q7Z5P4 300 aaPredicted RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 ERI1Q8IV48 349 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 STPG2Q8N412 459 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 FAM71E2Q8N5Q1 922 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 DNAAF3Q8N9W5 541 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR5AK3PQ8NH89 298 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 OR1S1Q8NH92 325 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 UBALD1Q8TB05 177 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM158Q8WZ71 300 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM54Q969K7 222 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM230Q96A57 120 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CAMK2N2Q96S95 79 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PAIP2Q9BPZ3 127 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 KCNS3Q9BQ31 491 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms