RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CDK5Q00535 292 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 BLMHQ13867 455 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 ZNF829Q3KNS6 432 aaPredicted RBP10.81□□□□□ -0.68
RTN3-207ENST00000536011 FAM76BQ5HYJ3 339 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 NCR3LG1Q68D85 454 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 THAP5Q7Z6K1 395 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 C8orf46Q8TAG6 207 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 ASB17Q8WXJ9 295 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 RPL3LQ92901 407 aaKnown RBP10.81□□□□□ -0.68
RTN3-207ENST00000536011 DCTN5Q9BTE1 182 aa10.81□□□□□ -0.68
RTN3-207ENST00000536011 SLC25A10Q9UBX3 287 aaPredicted RBP10.81□□□□□ -0.68
RTN3-207ENST00000536011 TMEM269A0A1B0GVZ9 245 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 A0A1B0GW55 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 A0A1W2PQ09 198 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 OR5B21A6NL26 309 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 M0R1W7 72 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 TIMM23O14925 209 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 GSC2O15499 205 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 ZNF254O75437 659 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 FCN3O75636 299 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L2P0CJ85 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L3P0CJ86 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L4P0CJ87 422 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L5P0CJ88 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L6P0CJ89 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L7P0CJ90 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 GLRA1P23415 457 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DCTDP32321 178 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 GPM6AP51674 278 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 CAV3P56539 151 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 GMFBP60983 142 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 CBX1P83916 185 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 APOFQ13790 326 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 SNAPC1Q16533 368 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 OCLNQ16625 522 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 CEACAM21Q3KPI0 293 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 ZBTB37Q5TC79 503 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4L9Q6RFH8 374 aaPredicted RBP10.8□□□□□ -0.68
RTN3-207ENST00000536011 ZNF788Q6ZQV5 615 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 TMEM179BQ7Z7N9 219 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 PDZD9Q8IXQ8 264 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 ZNF671Q8TAW3 534 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 HPSE2Q8WWQ2 592 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 TAF15Q92804 592 aaKnown RBP eCLIP10.8□□□□□ -0.68
RTN3-207ENST00000536011 NRBF2Q96F24 287 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 METTL8Q9H825 291 aaKnown RBP10.8□□□□□ -0.68
RTN3-207ENST00000536011 SIRT7Q9NRC8 400 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 PAPOLBQ9NRJ5 636 aaKnown RBP10.8□□□□□ -0.68
RTN3-207ENST00000536011 NLKQ9UBE8 527 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 DUX4Q9UBX2 424 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 KLHDC2Q9Y2U9 406 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 RNF114Q9Y508 228 aa10.8□□□□□ -0.68
RTN3-207ENST00000536011 TRBV23-1A0A0A0MS06 115 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 OR2AT4A6NND4 320 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 NPFFO15130 113 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 SIGLEC5O15389 551 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 AKR7A2O43488 359 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 FKBP6O75344 327 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 MTRF1O75570 445 aaKnown RBP10.79□□□□□ -0.68
RTN3-207ENST00000536011 NDUFB7P17568 137 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 SLC2A5P22732 501 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 RIDAP52758 137 aaKnown RBP10.79□□□□□ -0.68
RTN3-207ENST00000536011 ACTR3P61158 418 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 RELBQ01201 579 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 ROM1Q03395 351 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 ACSM1Q08AH1 577 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 RIPPLY1Q0D2K3 151 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 DHRS7BQ6IAN0 325 aaPredicted RBP10.79□□□□□ -0.68
RTN3-207ENST00000536011 KRT74Q7RTS7 529 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 TRPM8Q7Z2W7 1104 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 ZNF679Q8IYX0 411 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 BBS1Q8NFJ9 593 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 OR5T2Q8NGG2 359 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 OR5A2Q8NGI9 324 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 OR5D13Q8NGL4 314 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 OR5R1Q8NH85 324 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 ANGPTL6Q8NI99 470 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 SEH1LQ96EE3 360 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 LYZL4Q96KX0 146 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 GAFA1Q96PS6 74 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 CNN2Q99439 309 aaKnown RBP10.79□□□□□ -0.68
RTN3-207ENST00000536011 CITED1Q99966 193 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 WDR13Q9H1Z4 485 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 PPP1R3EQ9H7J1 279 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 MOB1AQ9H8S9 216 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 SNTG1Q9NSN8 517 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 FAM206AQ9NX38 181 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 TVP23BQ9NYZ1 205 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 ZNRD1Q9P1U0 126 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 VPREB3Q9UKI3 123 aa10.79□□□□□ -0.68
RTN3-207ENST00000536011 A0A1W2PPH5 198 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 ZNF732B4DXR9 585 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 ACAA1P09110 424 aaPredicted RBP10.78□□□□□ -0.68
RTN3-207ENST00000536011 GABRA2P47869 451 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 UBE2E1P51965 193 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 SMIM21Q3B7S5 101 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 ZNF684Q5T5D7 378 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 PLCXD3Q63HM9 321 aa10.78□□□□□ -0.68
RTN3-207ENST00000536011 HS3ST5Q8IZT8 346 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms