RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CCDC159P0C7I6 412 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 OCM2P0CE71 109 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 OCMP0CE72 109 aaPredicted RBP18.34■□□□□ 0.53
SSPN-204ENST00000535504 LCN2P80188 198 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 OR52I1Q8NGK6 324 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 OR10Z1Q8NGY1 313 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 OR2G2Q8NGZ5 317 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 ZNF671Q8TAW3 534 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 C10orf35Q96D05 121 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 TMEM246Q9BRR3 403 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 SSBP3Q9BWW4 388 aaPredicted RBP18.34■□□□□ 0.53
SSPN-204ENST00000535504 COMMD4Q9H0A8 199 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 ERVK13-1Q9NX77 482 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 ERVK-18Q9QC07 812 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 DNAJB11Q9UBS4 358 aa18.34■□□□□ 0.53
SSPN-204ENST00000535504 FN1P02751 2386 aaKnown RBP18.34■□□□□ 0.53
SSPN-204ENST00000535504 LOC107986453A0A1B0GWG9 222 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 J3QLI3 93 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 ZNF20P17024 532 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 HOXB4P17483 251 aaPredicted RBP18.33■□□□□ 0.52
SSPN-204ENST00000535504 CCL1P22362 96 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 CCR9P51686 369 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 ISL1P61371 349 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 FAM201AQ5SY85 155 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 SFRP4Q6FHJ7 346 aaPredicted RBP18.33■□□□□ 0.52
SSPN-204ENST00000535504 ZNF826PQ6ZT77 177 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 ZNF676Q8N7Q3 588 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 OR14K1Q8NGZ2 314 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 NEK6Q9HC98 313 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 CLN8Q9UBY8 286 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 NKX1-2Q9UD57 310 aaPredicted RBP18.33■□□□□ 0.52
SSPN-204ENST00000535504 MYRFQ9Y2G1 1151 aa18.33■□□□□ 0.52
SSPN-204ENST00000535504 EXOSC1Q9Y3B2 195 aaKnown RBP18.33■□□□□ 0.52
SSPN-204ENST00000535504 ANKRD61A6NGH8 418 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 H0YJX3 145 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 WBP4O75554 376 aaKnown RBP18.32■□□□□ 0.52
SSPN-204ENST00000535504 FAM157CP0CG43 387 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 MUC1P15941 1255 aaPredicted RBP18.32■□□□□ 0.52
SSPN-204ENST00000535504 CD80P33681 288 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 PITPNBP48739 271 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 NPY4RP50391 375 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 CSNK2BP67870 215 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 ALKBH1Q13686 389 aaKnown RBP18.32■□□□□ 0.52
SSPN-204ENST00000535504 CNN3Q15417 329 aaKnown RBP18.32■□□□□ 0.52
SSPN-204ENST00000535504 FDX2Q6P4F2 183 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 BTNL3Q6UXE8 466 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 WDR82Q6UXN9 313 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 KRT74Q7RTS7 529 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 ZNF573Q86YE8 665 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 RPL3LQ92901 407 aaKnown RBP18.32■□□□□ 0.52
SSPN-204ENST00000535504 POM121Q96HA1 1249 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 TLNRD1Q9H1K6 362 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 FGF20Q9NP95 211 aaPredicted RBP18.32■□□□□ 0.52
SSPN-204ENST00000535504 GPR173Q9NS66 373 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 HHLA2Q9UM44 414 aa18.32■□□□□ 0.52
SSPN-204ENST00000535504 A0A1B0GTI1 187 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 EFCAB10A6NFE3 127 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 WNT2P09544 360 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 THBS2P35442 1172 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 HSPA13P48723 471 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 HNRNPA0Q13151 305 aaKnown RBP18.31■□□□□ 0.52
SSPN-204ENST00000535504 SMN1Q16637 294 aaKnown RBP18.31■□□□□ 0.52
SSPN-204ENST00000535504 PRSS35Q8N3Z0 413 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 GCSAMQ8N6F7 178 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 SCCPDHQ8NBX0 429 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 HPSE2Q8WWQ2 592 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 PELI1Q96FA3 418 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 TMEM80Q96HE8 168 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 JAM3Q9BX67 310 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 POLDIP2Q9Y2S7 368 aa18.31■□□□□ 0.52
SSPN-204ENST00000535504 PPIAL4CA0A0B4J2A2 164 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 NKX6-3A6NJ46 265 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 A8MXK9 166 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 F5H0A9 414 aaPredicted RBP18.3■□□□□ 0.52
SSPN-204ENST00000535504 H3BSH0 61 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 ADAM20O43506 726 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 CFHR2P36980 270 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 SLC36A1Q7Z2H8 476 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 WDR86Q86TI4 376 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 C19orf18Q8NEA5 215 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 PP6455Q8WZ26 134 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 C12orf43Q96C57 262 aaKnown RBP18.3■□□□□ 0.52
SSPN-204ENST00000535504 MRI1Q9BV20 369 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 PPP1R3EQ9H7J1 279 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 DIMT1Q9UNQ2 313 aaKnown RBP18.3■□□□□ 0.52
SSPN-204ENST00000535504 CAB39Q9Y376 341 aaPredicted RBP18.3■□□□□ 0.52
SSPN-204ENST00000535504 ABCA2Q9BZC7 2435 aa18.3■□□□□ 0.52
SSPN-204ENST00000535504 TMEM212A6NML5 194 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 ISG15P05161 165 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 GLRA1P23415 457 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 KIR3DL2P43630 455 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 FAM76BQ5HYJ3 339 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 CD276Q5ZPR3 534 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 HAGHLQ6PII5 290 aaPredicted RBP18.29■□□□□ 0.52
SSPN-204ENST00000535504 Q6ZSR3 168 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 STX19Q8N4C7 294 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 OR13C3Q8NGS6 347 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 OR5AK2Q8NH90 309 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 TFAP2CQ92754 450 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 C7orf69Q9H7B7 122 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms