RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-215	ENST00000533440		A0A1W2PPE2	198 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440		A0A1W2PR64	198 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440		A0A1W2PRQ8	180 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440		A0A1W2PRV1	198 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	UNC119B	A6NIH7	251 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	FAM220BP	B1ANY3	271 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	ZNF823	P16415	610 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	CCL3L1	P16619	93 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	GLRA1	P23415	457 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	AZGP1	P25311	298 aa	Known RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	GNAL	P38405	381 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	GSK3A	P49840	483 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	SLC7A2	P52569	658 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	DLX6	P56179	175 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	MAGOH	P61326	146 aa	Known RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	RPL31	P62899	125 aa	Known RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	DGCR6	Q14129	220 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	ZNF273	Q14593	569 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	ZNF782	Q6ZMW2	699 aa	Predicted RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	PRSS45	Q7RTY3	260 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	DCXR	Q7Z4W1	244 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	CPLX4	Q7Z7G2	160 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	CALHM1	Q8IU99	346 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	CSNK2A3	Q8NEV1	391 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	OR11H6	Q8NGC7	330 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	OR52H1	Q8NGJ2	320 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	OR4K13	Q8NH42	304 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	OR5P3	Q8WZ94	311 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	TFAP2C	Q92754	450 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	TLCD1	Q96CP7	247 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	REEP6	Q96HR9	211 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	ASCL2	Q99929	193 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	COPS4	Q9BT78	406 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	RTL8A	Q9BWD3	113 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	PAPOLG	Q9BWT3	736 aa	Known RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	TMEM120A	Q9BXJ8	343 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	FGF23	Q9GZV9	251 aa	Predicted RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	FN3K	Q9H479	309 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	N6AMT1	Q9Y5N5	214 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	MPC1	Q9Y5U8	109 aa		6.22	□□□□□ -1.41
NXF1-215	ENST00000533440	ANXA2P2	A6NMY6	339 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	C17orf98	A8MV24	154 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	TBX1	O43435	398 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	MTRF1	O75570	445 aa	Known RBP	6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	NPPA	P01160	153 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ARG1	P05089	322 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	LYL1	P12980	280 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	JUNB	P17275	347 aa	Predicted RBP	6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	CFL1	P23528	166 aa	Known RBP	6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	CHAT	P28329	748 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	PRDX4	Q13162	271 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	SNCB	Q16143	134 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	TIGD6	Q17RP2	521 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	IFI44L	Q53G44	452 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	COQ5	Q5HYK3	327 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	KHDC1L	Q5JSQ8	128 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ZNF770	Q6IQ21	691 aa	Predicted RBP	6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	CBLL1	Q75N03	491 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	C16orf82	Q7Z2V1	217 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	PIGW	Q7Z7B1	504 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440		Q8NFD4	153 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	OR2T12	Q8NG77	320 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	OR51D1	Q8NGF3	324 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	OR13D1	Q8NGV5	346 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ZNRF4	Q8WWF5	429 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	HPSE2	Q8WWQ2	592 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	SLAMF6	Q96DU3	332 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	P2RX4	Q99571	388 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	NSRP1	Q9H0G5	558 aa	Known RBP	6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	OR52D1	Q9H346	318 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	YY1AP1	Q9H869	796 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	SP140L	Q9H930	580 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ABCB9	Q9NP78	766 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	CENPM	Q9NSP4	180 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ZNF319	Q9P2F9	582 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	NKX1-2	Q9UD57	310 aa	Predicted RBP	6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	CD300A	Q9UGN4	299 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ENPP4	Q9Y6X5	453 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	COMMD3-BMI1	R4GMX3	469 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	FRAS1	Q86XX4	4008 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	ALMS1	Q8TCU4	4167 aa		6.21	□□□□□ -1.42
NXF1-215	ENST00000533440	TRBV4-1	A0A0J9YWV2	114 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	TVP23A	A6NH52	213 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	ZNF850	A8MQ14	1090 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	ZNF878	C9JN71	531 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	IDH3B	O43837	385 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	CST4	P01036	141 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	RBP4	P02753	201 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	LPL	P06858	475 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	H1F0	P07305	194 aa	Known RBP	6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	ANXA2	P07355	339 aa	Known RBP	6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	ACKR3	P25106	362 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	SLC6A1	P30531	599 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	SLC6A6	P31641	620 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	PYCR1	P32322	319 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	MYCNOS	P40205	109 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	CX3CR1	P49238	355 aa		6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	CEBPD	P49716	269 aa	Predicted RBP	6.2	□□□□□ -1.42
NXF1-215	ENST00000533440	ENTPD1	P49961	510 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms