RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SLC17A2O00624 439 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 OR7C2O60412 319 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 LY86O95711 162 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 SMIM18P0DKX4 95 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 PAX6P26367 422 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 PSMB6P28072 239 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC7A5P1Q8MH63 180 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 PRR7Q8TB68 274 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 MARC2Q969Z3 335 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 IL20Q9NYY1 176 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 TRAV1-2A0A0B4J238 106 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 TIAL1Q01085 375 aaKnown RBP eCLIP13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 APH1BQ8WW43 257 aa13.21□□□□□ -0.3
PCDHA9-202ENST00000532602 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 NCBP2LA6PVI3 153 aaKnown RBP13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 H3BMH7 237 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PDGFBP01127 241 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 SEMG1P04279 462 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 TAGLN2P37802 199 aaKnown RBP13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 CEACAM3P40198 252 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 FAM122BQ7Z309 247 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 GAL3ST2Q9H3Q3 398 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 KPTNQ9Y664 436 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 LRP3O75074 770 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 HRASP01112 189 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PRR35P0CG20 571 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PRSS12P56730 875 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 TMUB2Q71RG4 321 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PATE4P0C8F1 98 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 HRH1P35367 487 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PRDX4Q13162 271 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC38A6Q8IZM9 456 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 RND1Q92730 232 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PTDSS2Q9BVG9 487 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 GPR31O00270 319 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 SSSCA1O60232 199 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 CDC14BO60729 498 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PIGPP57054 158 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 STUMQ69YW2 141 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 MFSD4AQ8N468 514 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 AMDHD2Q9Y303 409 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 AQP7P3A6NL99 342 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 KCNJ3P48549 501 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 TMEM182Q6ZP80 229 aaPredicted RBP13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 ARRDC1Q8N5I2 433 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 OR5D13Q8NGL4 314 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 LHX4Q969G2 390 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC26A1Q9H2B4 701 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 PSENENQ9NZ42 101 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 SIGLEC7Q9Y286 467 aa13.2□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF724A8MTY0 619 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 CYTIPO60759 359 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 TNFAIP6P98066 277 aaPredicted RBP13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 GPNMBQ14956 572 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 FAM27D1Q5T7N8 215 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 ACOT7LQ6ZUV0 252 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 SERTM1A2A2V5 107 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 NTN1O95631 604 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 NHLRC1Q6VVB1 395 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 PIGMQ9H3S5 423 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 SCGB1D1O95968 90 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 PI3P19957 117 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 BAMBIQ13145 260 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 CBLN3Q6UW01 205 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 PRSS42Q7Z5A4 293 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 AMMECR1Q9Y4X0 333 aaPredicted RBP13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 MAGEA5P43359 124 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 CALHM3Q86XJ0 350 aa13.19□□□□□ -0.3
PCDHA9-202ENST00000532602 COX7A2P2O60397 106 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 ACTL6AO96019 429 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 NGFP01138 241 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 RAB7AP51149 207 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 RAC3P60763 192 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 TLE1Q04724 770 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 ZIC1Q15915 447 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 IGFBP7Q16270 282 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 PHYHD1Q5SRE7 291 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 OR2W3Q7Z3T1 314 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 BPIFCQ8NFQ6 507 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 OR8U1Q8NH10 309 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 OR5B3Q8NH48 314 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 UBALD1Q8TB05 177 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 SIRT5Q9NXA8 310 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 TAAR3PQ9P1P4 343 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 hADV38S2A0JD32 116 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 H7BYZ3 331 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 M0R1X1 148 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 ANGPTL7O43827 346 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 EPPINO95925 133 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 RPL12P30050 165 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 FBXW5Q969U6 566 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 MRPS18BQ9Y676 258 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms