RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CDC42P60953 191 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 GNG3P63215 75 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 CEP78Q5JTW2 689 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 BCL2L15Q5TBC7 163 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ZBTB37Q5TC79 503 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 METTL11BQ5VVY1 283 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 C10orf67Q8IYJ2 551 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 OR5A2Q8NGI9 324 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF671Q8TAW3 534 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 HPSE2Q8WWQ2 592 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF48Q96MX3 618 aaPredicted RBP14.28□□□□□ -0.12
PHRF1-204ENST00000532550 DUX5Q96PT3 197 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 GABARAPL3Q9BY60 117 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 CNTD2Q9H8S5 307 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 MOB1AQ9H8S9 216 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ZMAT3Q9HA38 289 aaKnown RBP14.28□□□□□ -0.12
PHRF1-204ENST00000532550 SNTG1Q9NSN8 517 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ENPP5Q9UJA9 477 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 OR52A1Q9UKL2 312 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ORC6Q9Y5N6 252 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 SNX5Q9Y5X3 404 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 R4GMQ9 66 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 GPR37O15354 613 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 DHRS3O75911 302 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 IGLV3-1P01715 115 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 TTRP02766 147 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 KRT8P05787 483 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 OR2T7P0C7T2 308 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 HTR1FP30939 366 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 ARF6P62330 175 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 MFGE8Q08431 387 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 KPNB1Q14974 876 aaKnown RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 ATPAF1Q5TC12 328 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 ELMOD2Q8IZ81 293 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 C3orf56Q8N813 242 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 YIPF7Q8N8F6 280 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 OR2T27Q8NH04 317 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 RFKQ969G6 155 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 WDFY2Q96P53 400 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 RAB3IPQ96QF0 476 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 TBX5Q99593 518 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 FGF23Q9GZV9 251 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 DNTTIP1Q9H147 329 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 WDR13Q9H1Z4 485 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 OR51I2Q9H344 312 aa14.27□□□□□ -0.13
PHRF1-204ENST00000532550 MRM2Q9UI43 246 aaKnown RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 SOX21Q9Y651 276 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-204ENST00000532550 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 OR5B21A6NL26 309 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 SRSF10O75494 262 aaKnown RBP14.26□□□□□ -0.13
PHRF1-204ENST00000532550 RPP14O95059 124 aaKnown RBP14.26□□□□□ -0.13
PHRF1-204ENST00000532550 NRASP01111 189 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 SFTPBP07988 381 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 FAHP16930 419 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 GLRA1P23415 457 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 TGM4P49221 684 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 ELF3P78545 371 aaPredicted RBP14.26□□□□□ -0.13
PHRF1-204ENST00000532550 IKZF1Q13422 519 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 TMED1Q13445 227 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 PDCD1Q15116 288 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 DMRTC1Q5HYR2 192 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 ZNF684Q5T5D7 378 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 PLCXD3Q63HM9 321 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 ZFP1Q6P2D0 407 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 PLEKHG7Q6ZR37 379 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 FAM216BQ8N7L0 139 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 TRUB1Q8WWH5 349 aaKnown RBP14.26□□□□□ -0.13
PHRF1-204ENST00000532550 ZDHHC16Q969W1 377 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 SLC25A28Q96A46 364 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 MED30Q96HR3 178 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 IMPAD1Q9NX62 359 aa14.26□□□□□ -0.13
PHRF1-204ENST00000532550 RPUSD1Q9UJJ7 312 aaKnown RBP14.26□□□□□ -0.13
PHRF1-204ENST00000532550 A0A1B0GW55 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 NKX6-3A6NJ46 265 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 FCN3O75636 299 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 RHBDL1O75783 438 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L2P0CJ85 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L3P0CJ86 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L4P0CJ87 422 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L5P0CJ88 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L6P0CJ89 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L7P0CJ90 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 MMP9P14780 707 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 CFPP27918 469 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 CLVS2Q5SYC1 327 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 STUMQ69YW2 141 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4L9Q6RFH8 374 aaPredicted RBP14.25□□□□□ -0.13
PHRF1-204ENST00000532550 OR10H4Q8NGA5 316 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 EME1Q96AY2 570 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 TMIGD2Q96BF3 282 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 TBX15Q96SF7 602 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 NLKQ9UBE8 527 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 DUX4Q9UBX2 424 aa14.25□□□□□ -0.13
PHRF1-204ENST00000532550 CENPVL3A0A0U1RRI6 287 aa14.24□□□□□ -0.13
PHRF1-204ENST00000532550 A0A1W2PQL4 384 aaPredicted RBP14.24□□□□□ -0.13
PHRF1-204ENST00000532550 METTL15A6NJ78 407 aa14.24□□□□□ -0.13
PHRF1-204ENST00000532550 OR2AT4A6NND4 320 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms