RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 RPS9P46781 194 aaKnown RBP2.58□□□□□ -2
CD44-229ENST00000528672 RPL29P47914 159 aaKnown RBP2.58□□□□□ -2
CD44-229ENST00000528672 LGALS7P47929 136 aa2.58□□□□□ -2
CD44-229ENST00000528672 UGT2B15P54855 530 aa2.58□□□□□ -2
CD44-229ENST00000528672 WNT4P56705 351 aa2.58□□□□□ -2
CD44-229ENST00000528672 KLF3P57682 345 aaPredicted RBP2.58□□□□□ -2
CD44-229ENST00000528672 TAS2R41P59536 307 aa2.58□□□□□ -2
CD44-229ENST00000528672 RPS20P60866 119 aaKnown RBP2.58□□□□□ -2
CD44-229ENST00000528672 RAB2AP61019 212 aa2.58□□□□□ -2
CD44-229ENST00000528672 RAP1AP62834 184 aa2.58□□□□□ -2
CD44-229ENST00000528672 TLE4Q04727 773 aa2.58□□□□□ -2
CD44-229ENST00000528672 EMX2Q04743 252 aa2.58□□□□□ -2
CD44-229ENST00000528672 OXA1LQ15070 435 aa2.58□□□□□ -2
CD44-229ENST00000528672 SPA17Q15506 151 aa2.58□□□□□ -2
CD44-229ENST00000528672 MAPK14Q16539 360 aa2.58□□□□□ -2
CD44-229ENST00000528672 ATP6V1FQ16864 119 aa2.58□□□□□ -2
CD44-229ENST00000528672 ZNF630Q2M218 657 aaPredicted RBP2.58□□□□□ -2
CD44-229ENST00000528672 CEACAM21Q3KPI0 293 aa2.58□□□□□ -2
CD44-229ENST00000528672 KRTAP27-1Q3LI81 207 aa2.58□□□□□ -2
CD44-229ENST00000528672 SLC22A6Q4U2R8 563 aa2.58□□□□□ -2
CD44-229ENST00000528672 EIPR1Q53HC9 387 aa2.58□□□□□ -2
CD44-229ENST00000528672 PDZD11Q5EBL8 140 aa2.58□□□□□ -2
CD44-229ENST00000528672 STUMQ69YW2 141 aa2.58□□□□□ -2
CD44-229ENST00000528672 ZNF613Q6PF04 617 aa2.58□□□□□ -2
CD44-229ENST00000528672 FAM131AQ6UXB0 335 aa2.58□□□□□ -2
CD44-229ENST00000528672 LINC00336Q6ZUF6 198 aa2.58□□□□□ -2
CD44-229ENST00000528672 COX15Q7KZN9 410 aa2.58□□□□□ -2
CD44-229ENST00000528672 SLC16A13Q7RTY0 426 aa2.58□□□□□ -2
CD44-229ENST00000528672 ZBTB8OSQ8IWT0 167 aa2.58□□□□□ -2
CD44-229ENST00000528672 KIR2DL5AQ8N109 375 aa2.58□□□□□ -2
CD44-229ENST00000528672 LRRC52Q8N7C0 313 aa2.58□□□□□ -2
CD44-229ENST00000528672 ZNF283Q8N7M2 679 aa2.58□□□□□ -2
CD44-229ENST00000528672 SLC26A10Q8NG04 563 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR6T1Q8NGN1 323 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR4A4PQ8NGN8 299 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR9Q1Q8NGQ5 310 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR6N2Q8NGY6 317 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR4S2Q8NH73 311 aa2.58□□□□□ -2
CD44-229ENST00000528672 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
CD44-229ENST00000528672 VN1R17PQ8TDU5 208 aa2.58□□□□□ -2
CD44-229ENST00000528672 ITLN1Q8WWA0 313 aa2.58□□□□□ -2
CD44-229ENST00000528672 RGP1Q92546 391 aaPredicted RBP2.58□□□□□ -2
CD44-229ENST00000528672 GHSRQ92847 366 aa2.58□□□□□ -2
CD44-229ENST00000528672 ISOC2Q96AB3 205 aa2.58□□□□□ -2
CD44-229ENST00000528672 RPEQ96AT9 228 aa2.58□□□□□ -2
CD44-229ENST00000528672 TM4SF18Q96CE8 201 aa2.58□□□□□ -2
CD44-229ENST00000528672 FLYWCH2Q96CP2 140 aaKnown RBP2.58□□□□□ -2
CD44-229ENST00000528672 MED8Q96G25 268 aa2.58□□□□□ -2
CD44-229ENST00000528672 SEC22AQ96IW7 307 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR10C1Q96KK4 312 aa2.58□□□□□ -2
CD44-229ENST00000528672 JSRP1Q96MG2 331 aaPredicted RBP2.58□□□□□ -2
CD44-229ENST00000528672 Q96MT0 163 aa2.58□□□□□ -2
CD44-229ENST00000528672 ZNF599Q96NL3 588 aa2.58□□□□□ -2
CD44-229ENST00000528672 OR5B12Q96R08 314 aa2.58□□□□□ -2
CD44-229ENST00000528672 PSMB7Q99436 277 aa2.58□□□□□ -2
CD44-229ENST00000528672 PHB2Q99623 299 aa2.58□□□□□ -2
CD44-229ENST00000528672 MCHR1Q99705 422 aa2.58□□□□□ -2
CD44-229ENST00000528672 MICU1Q9BPX6 476 aa2.58□□□□□ -2
CD44-229ENST00000528672 VPS25Q9BRG1 176 aa2.58□□□□□ -2
CD44-229ENST00000528672 CDCA4Q9BXL8 241 aa2.58□□□□□ -2
CD44-229ENST00000528672 CHIAQ9BZP6 476 aa2.58□□□□□ -2
CD44-229ENST00000528672 ING2Q9H160 280 aa2.58□□□□□ -2
CD44-229ENST00000528672 MIXL1Q9H2W2 232 aa2.58□□□□□ -2
CD44-229ENST00000528672 TMEM27Q9HBJ8 222 aa2.58□□□□□ -2
CD44-229ENST00000528672 ISYNA1Q9NPH2 558 aa2.58□□□□□ -2
CD44-229ENST00000528672 ARMCX1Q9P291 453 aa2.58□□□□□ -2
CD44-229ENST00000528672 SPRR3Q9UBC9 169 aa2.58□□□□□ -2
CD44-229ENST00000528672 DHCR7Q9UBM7 475 aaKnown RBP2.58□□□□□ -2
CD44-229ENST00000528672 FBXO5Q9UKT4 447 aa2.58□□□□□ -2
CD44-229ENST00000528672 HHLA2Q9UM44 414 aa2.58□□□□□ -2
CD44-229ENST00000528672 PRSS21Q9Y6M0 314 aa2.58□□□□□ -2
CD44-229ENST00000528672 V9GYY9 64 aa2.58□□□□□ -2
CD44-229ENST00000528672 ZNF609O15014 1411 aa2.58□□□□□ -2
CD44-229ENST00000528672 GAPVD1Q14C86 1478 aa2.58□□□□□ -2
CD44-229ENST00000528672 RAPGEF2Q9Y4G8 1499 aa2.58□□□□□ -2
CD44-229ENST00000528672 CEP152O94986 1710 aa2.57□□□□□ -2
CD44-229ENST00000528672 IGHV3OR16-10A0A075B7F0 116 aa2.57□□□□□ -2
CD44-229ENST00000528672 TRAV9-2A0A087WT02 112 aa2.57□□□□□ -2
CD44-229ENST00000528672 A0A0G2JMP0 313 aa2.57□□□□□ -2
CD44-229ENST00000528672 A0A0X1KG70 313 aa2.57□□□□□ -2
CD44-229ENST00000528672 A0A1B0GWB2 263 aa2.57□□□□□ -2
CD44-229ENST00000528672 IGSF23A1L1A6 192 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR5B21A6NL26 309 aa2.57□□□□□ -2
CD44-229ENST00000528672 CENPXA8MT69 81 aa2.57□□□□□ -2
CD44-229ENST00000528672 EPM2AB3EWF7 344 aa2.57□□□□□ -2
CD44-229ENST00000528672 C15orf65H3BRN8 121 aa2.57□□□□□ -2
CD44-229ENST00000528672 J3QLI3 93 aa2.57□□□□□ -2
CD44-229ENST00000528672 K7EN84 100 aa2.57□□□□□ -2
CD44-229ENST00000528672 KCNK1O00180 336 aa2.57□□□□□ -2
CD44-229ENST00000528672 PLPP3O14495 311 aa2.57□□□□□ -2
CD44-229ENST00000528672 TP53I11O14683 189 aa2.57□□□□□ -2
CD44-229ENST00000528672 HSD17B6O14756 317 aa2.57□□□□□ -2
CD44-229ENST00000528672 HPGDSO60760 199 aa2.57□□□□□ -2
CD44-229ENST00000528672 MT-CO2P00403 227 aa2.57□□□□□ -2
CD44-229ENST00000528672 RENP00797 406 aa2.57□□□□□ -2
CD44-229ENST00000528672 C1QBP02746 253 aa2.57□□□□□ -2
CD44-229ENST00000528672 C1QCP02747 245 aa2.57□□□□□ -2
CD44-229ENST00000528672 THY1P04216 161 aa2.57□□□□□ -2
CD44-229ENST00000528672 CD74P04233 296 aa2.57□□□□□ -2
CD44-229ENST00000528672 ALDOBP05062 364 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms