RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 COA4Q9NYJ1 87 aa8.72□□□□□ -1.01
SF3B2-206ENST00000528302 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-206ENST00000528302 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-206ENST00000528302 RAB19A4D1S5 217 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 FAM157CP0CG43 387 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 FAHP16930 419 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 FCGR2CP31995 323 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 CAPZBP47756 277 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 ZNF674Q2M3X9 581 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 GRINAQ7Z429 371 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 WDR77Q9BQA1 342 aaPredicted RBP8.71□□□□□ -1.01
SF3B2-206ENST00000528302 SPACA1Q9HBV2 294 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 SLC17A5Q9NRA2 495 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 PLSCR4Q9NRQ2 329 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 PLA2G2EQ9NZK7 142 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 FBXL17Q9UF56 701 aa8.71□□□□□ -1.01
SF3B2-206ENST00000528302 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.01
SF3B2-206ENST00000528302 TNRC18O15417 2968 aaPredicted RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 A0A1W2PPE2 198 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 FRG2CA6NGY1 282 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 TTLL8A6PVC2 850 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 FOLR1P15328 257 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 SLC6A8P48029 635 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 TLE1Q04724 770 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 HNF4GQ14541 408 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 OR8B12Q8NGG6 310 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 ERGIC1Q969X5 290 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 S100A13Q99584 98 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 VN1R1Q9GZP7 353 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 MMP26Q9NRE1 261 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 RCC2Q9P258 522 aaKnown RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 NXT1Q9UKK6 140 aaKnown RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 K7EPK0 472 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 CDC14BO60729 498 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 DXOO77932 396 aaKnown RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 DBHP09172 617 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 PF4V1P10720 104 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 RBMXP38159 391 aaKnown RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 PCP4P48539 62 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 RAB5BP61020 215 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 MIDNQ504T8 468 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 FAM209BQ5JX69 171 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 FAM71E2Q8N5Q1 922 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 OR1L3Q8NH93 324 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 MRPL24Q96A35 216 aaKnown RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 PHYHIPLQ96FC7 376 aa8.71□□□□□ -1.02
SF3B2-206ENST00000528302 ZNF2Q9BSG1 426 aaPredicted RBP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.71□□□□□ -1.02
SF3B2-206ENST00000528302 C1orf196B1AJZ1 125 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 B4E171 279 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 ZNF814B7Z6K7 855 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 TSPAN15O95858 294 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 APOC1P02654 83 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 PNLIPP16233 465 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 HIST1H1DP16402 221 aaKnown RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 FBLP22087 321 aaKnown RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 P2RY4P51582 365 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 TMEM33P57088 247 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 HABP2Q14520 560 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 EIF2S3LQ2VIR3 472 aaKnown RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 H1FNTQ75WM6 255 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 HOGA1Q86XE5 327 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 ZDHHC22Q8N966 263 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 LIPHQ8WWY8 451 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 ASB10Q8WXI3 467 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 EDAQ92838 391 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 DAZLQ92904 295 aaKnown RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 KIRREL1Q96J84 757 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 SH3BGRL3Q9H299 93 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 RGCCQ9H4X1 137 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 FAM206AQ9NX38 181 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 SLC2A8Q9NY64 477 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 GHRLQ9UBU3 117 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 MMP24Q9Y5R2 645 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 RP1L1Q8IWN7 2480 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 CACNA1DQ01668 2161 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 SPRY1O43609 319 aaPredicted RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 SNAPC5O75971 98 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 SFT2D2O95562 160 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 IL2RAP01589 272 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 FABP1P07148 127 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 FCGR2AP12318 317 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 RPL12P30050 165 aaKnown RBP8.7□□□□□ -1.02
SF3B2-206ENST00000528302 SCAND1P57086 179 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 YPEL5P62699 121 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 TAF9Q16594 264 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 AWAT1Q58HT5 328 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 C1orf100Q5SVJ3 147 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 AKR7LQ8NHP1 331 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 GPR132Q9UNW8 380 aa8.7□□□□□ -1.02
SF3B2-206ENST00000528302 NUP210LQ5VU65 1888 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 FAM230AA0A1W2PPH8 454 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 IGKV3-11P04433 115 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 TMEM225BP0DP42 221 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 CD79AP11912 226 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 ZNF44P15621 663 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 CX3CR1P49238 355 aa8.69□□□□□ -1.02
SF3B2-206ENST00000528302 CSNK1EP49674 416 aaKnown RBP8.69□□□□□ -1.02
SF3B2-206ENST00000528302 DCAF7P61962 342 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms