RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 TMEM165Q9HC07 324 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 C1orf123Q9NWV4 160 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 RAB26Q9ULW5 256 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 HHLA2Q9UM44 414 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 POLR3KQ9Y2Y1 108 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-203ENST00000526117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.47□□□□□ -0.09
LMX1B-203ENST00000526117 CSPG4Q6UVK1 2322 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 ABCA1O95477 2261 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 PPIAL4CA0A0B4J2A2 164 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 ISPDA4D126 451 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 A8MXK9 166 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 NDUFA2O43678 99 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 MSMBP08118 114 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 RPL22L1Q6P5R6 122 aaKnown RBP14.47□□□□□ -0.09
LMX1B-203ENST00000526117 DCDC5Q6ZRR9 648 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 UTS2BQ765I0 119 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 RNF170Q96K19 258 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 OR51I2Q9H344 312 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 NARFLQ9H6Q4 476 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 CHCHD3Q9NX63 227 aaKnown RBP14.47□□□□□ -0.09
LMX1B-203ENST00000526117 MIOXQ9UGB7 285 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 ABCA2Q9BZC7 2435 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 TLN2Q9Y4G6 2542 aa14.47□□□□□ -0.09
LMX1B-203ENST00000526117 HIVEP2P31629 2446 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 TRAV20A0A0B4J274 112 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 IGHV3-64DA0A0J9YX35 117 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 ANKRD61A6NGH8 418 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 A6NLC8 198 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 CEACAM18A8MTB9 384 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 SRRM5B3KS81 715 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 FAM157AC9JC47 383 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 LGALS8O00214 317 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 SLC1A7O00341 560 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 XPNPEP2O43895 674 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 GATBO75879 557 aaKnown RBP14.46□□□□□ -0.09
LMX1B-203ENST00000526117 ZFPL1O95159 310 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 MUC1P15941 1255 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-203ENST00000526117 PCMT1P22061 227 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 PLCXD3Q63HM9 321 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 BPIFB6Q8NFQ5 453 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 OR51F2Q8NH61 342 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 C12orf43Q96C57 262 aaKnown RBP14.46□□□□□ -0.09
LMX1B-203ENST00000526117 TMEM246Q9BRR3 403 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 BABAM2Q9NXR7 383 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 KCNS2Q9ULS6 477 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 LRCH1Q9Y2L9 728 aa14.46□□□□□ -0.09
LMX1B-203ENST00000526117 TRAV38-1A0A0B4J264 116 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 PQLC2LA1A4F0 135 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 OOEPA6NGQ2 149 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 E9PI62 339 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 CDIPTO14735 213 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 TNFRSF13BO14836 293 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-203ENST00000526117 OGG1O15527 345 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 LMX1BO60663 402 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 TGFAP01135 160 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 ACAA1P09110 424 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-203ENST00000526117 WNT2P09544 360 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 MPZP25189 248 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 GPM6AP51674 278 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 HNRNPA0Q13151 305 aaKnown RBP14.45□□□□□ -0.1
LMX1B-203ENST00000526117 CDK5R1Q15078 307 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 ODF4Q2M2E3 257 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 CEP78Q5JTW2 689 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 ZNF826PQ6ZT77 177 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 MOB3CQ70IA8 216 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 GLCCI1Q86VQ1 547 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 ZNF573Q86YE8 665 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 ZNF676Q8N7Q3 588 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 SCCPDHQ8NBX0 429 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 DNAAF1Q8NEP3 725 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 OR5AK2Q8NH90 309 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 CDCA4Q9BXL8 241 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 COMMD4Q9H0A8 199 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 SCN3BQ9NY72 215 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 PCDHB10Q9UN67 800 aa14.45□□□□□ -0.1
LMX1B-203ENST00000526117 TRBV2A0A0J9YWF9 115 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 ZNF732B4DXR9 585 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.44□□□□□ -0.1
LMX1B-203ENST00000526117 NOS1APO75052 506 aaPredicted RBP14.44□□□□□ -0.1
LMX1B-203ENST00000526117 ALX3O95076 343 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 SERPINA3P01011 423 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 CDK1P06493 297 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 GATA3P23771 443 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 TAS2R43P59537 309 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 SLC35A2P78381 396 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 C11orf91Q3C1V1 193 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 OR2G6Q5TZ20 316 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 AHSA2Q719I0 299 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 RDH10Q8IZV5 341 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 STX19Q8N4C7 294 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 LRRC29Q8WV35 223 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 MYDGFQ969H8 173 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 TMEM186Q96B77 213 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 SMIM19Q96E16 107 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 DUSP21Q9H596 190 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 YAE1D1Q9NRH1 226 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 ERVK-18Q9QC07 812 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 KAAG1Q9UBP8 84 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 LPAR3Q9UBY5 353 aa14.44□□□□□ -0.1
LMX1B-203ENST00000526117 CLEC2DQ9UHP7 191 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms