RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
PVT1-215ENST00000522963 ZCCHC4Q9H5U6 513 aa10.13□□□□□ -0.79
PVT1-215ENST00000522963 RNF167Q9H6Y7 350 aa10.13□□□□□ -0.79
PVT1-215ENST00000522963 BARX1Q9HBU1 254 aaPredicted RBP10.13□□□□□ -0.79
PVT1-215ENST00000522963 CYSLTR2Q9NS75 346 aa10.13□□□□□ -0.79
PVT1-215ENST00000522963 TXNL4BQ9NX01 149 aaKnown RBP10.13□□□□□ -0.79
PVT1-215ENST00000522963 CGGBP1Q9UFW8 167 aaPredicted RBP10.13□□□□□ -0.79
PVT1-215ENST00000522963 SSR3Q9UNL2 185 aa10.13□□□□□ -0.79
PVT1-215ENST00000522963 MPC1Q9Y5U8 109 aa10.13□□□□□ -0.79
PVT1-215ENST00000522963 LOC100506127A0A0U1RQW1 187 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 C17orf100A8MU93 164 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 H7C417 338 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 AIREO43918 545 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 IGHV1-46P01743 117 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 ATF1P18846 271 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 FGF9P31371 208 aaPredicted RBP10.12□□□□□ -0.79
PVT1-215ENST00000522963 TIMM50Q3ZCQ8 353 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 HSD17B12Q53GQ0 312 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 PRSS57Q6UWY2 283 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 SLC16A12Q6ZSM3 486 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 ANKRD13BQ86YJ7 626 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 CLVS1Q8IUQ0 354 aaPredicted RBP10.12□□□□□ -0.79
PVT1-215ENST00000522963 OR2Z1Q8NG97 314 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 OR1M1Q8NGA1 313 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 OR51A2Q8NGJ7 313 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 OR5D14Q8NGL3 314 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 NPRL2Q8WTW4 380 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 OR5P3Q8WZ94 311 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 SORCS2Q96PQ0 1159 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 CENPOQ9BU64 300 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 FOXJ3Q9UPW0 622 aa10.12□□□□□ -0.79
PVT1-215ENST00000522963 CHD3Q12873 2000 aaKnown RBP10.12□□□□□ -0.79
PVT1-215ENST00000522963 MAP1AP78559 2803 aaPredicted RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 SHISA3A0PJX4 238 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 ANXA2P2A6NMY6 339 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 F5H5P2 479 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 SULT1B1O43704 296 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 ARL6IP5O75915 188 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 GABARAPO95166 117 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 ERCC1P07992 297 aaPredicted RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 ADH4P08319 380 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 SRMP19623 302 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 RAB3AP20336 220 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 CALRP27797 417 aaKnown RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 THBS2P35442 1172 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 TGFBR1P36897 503 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 PPOXP50336 477 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 EFNA4P52798 201 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 LSM3P62310 102 aaKnown RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 CEACAM21Q3KPI0 293 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 SPRNQ5BIV9 151 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 GDPGP1Q6ZNW5 385 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 LRRTM1Q86UE6 522 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 CIARTQ8N365 385 aaPredicted RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 ZNF525Q8N782 197 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 OR8S1Q8NH09 359 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 ELMOD3Q96FG2 381 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 RNF170Q96K19 258 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 HIST1H2AAQ96QV6 131 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 MICU1Q9BPX6 476 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 TMUB1Q9BVT8 246 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 RAB1BQ9H0U4 201 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 MS4A5Q9H3V2 200 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 ABCB9Q9NP78 766 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 CKLFQ9UBR5 152 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 ZDHHC8Q9ULC8 765 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 NOP16Q9Y3C1 178 aaKnown RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
PVT1-215ENST00000522963 HIVEP1P15822 2718 aa10.11□□□□□ -0.79
PVT1-215ENST00000522963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.1□□□□□ -0.79
PVT1-215ENST00000522963 IGHV3-64DA0A0J9YX35 117 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 LOC100289279A0A1B0GTE1 492 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 PQLC2LA1A4F0 135 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 ALX3O95076 343 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 MAS1P04201 325 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 CD55P08174 381 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 ADRA2CP18825 462 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 AZGP1P25311 298 aaKnown RBP10.1□□□□□ -0.79
PVT1-215ENST00000522963 CD200P41217 278 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 GPM6AP51674 278 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 PPP3R1P63098 170 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
PVT1-215ENST00000522963 MAB21L1Q13394 359 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 CNN3Q15417 329 aaKnown RBP10.1□□□□□ -0.79
PVT1-215ENST00000522963 CTF1Q16619 201 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 CLEC2AQ6UVW9 174 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 RNF144BQ7Z419 303 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 WDR86Q86TI4 376 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 SPERTQ8NA61 448 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 MAPK1IP1LQ8NDC0 245 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 OR52N4Q8NGI2 321 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 OR5A2Q8NGI9 324 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 TRMT10AQ8TBZ6 339 aaKnown RBP10.1□□□□□ -0.79
PVT1-215ENST00000522963 ITLN1Q8WWA0 313 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 MEGF10Q96KG7 1140 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 TECTBQ96PL2 329 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 OR2V2Q96R30 315 aa10.1□□□□□ -0.79
PVT1-215ENST00000522963 DIRC2Q96SL1 478 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms