RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 SYT7O43581 403 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 FOXH1O75593 365 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 LIMS3P0CW19 117 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 LIMS4P0CW20 117 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 GATA3P23771 443 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 KIR3DL2P43630 455 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 GPM6AP51674 278 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 NANOS3P60323 173 aaKnown RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 SEC61A1P61619 476 aaKnown RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 GNG3P63215 75 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 CSNK2BP67870 215 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 LCN2P80188 198 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 HOXA4Q00056 320 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 KCNJ8Q15842 424 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 DMRTC1Q5HYR2 192 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 CEP78Q5JTW2 689 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 TMEM244Q5VVB8 128 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 TEX36Q5VZQ5 186 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 LAIR2Q6ISS4 152 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 FAHD2BQ6P2I3 314 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 LYPD2Q6UXB3 125 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 ZNF841Q6ZN19 808 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 DCDC5Q6ZRR9 648 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 ZNF771Q7L3S4 317 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 C8orf59Q8N0T1 100 aaPredicted RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 BOLLQ8N9W6 283 aaKnown RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 C19orf18Q8NEA5 215 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 RPL3LQ92901 407 aaKnown RBP9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 C10orf35Q96D05 121 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 FAHD2AQ96GK7 314 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 C4orf36Q96KX1 117 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 ALG8Q9BVK2 526 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 TRIM36Q9NQ86 728 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 PLCXD1Q9NUJ7 323 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 ABCA2Q9BZC7 2435 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 ARHGAP32A7KAX9 2087 aa9.32□□□□□ -0.92
SCARNA20-201ENST00000516768 A0A1B0GVI7 797 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 hCG_1807616A0A1W2PRN6 198 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 IRGMA1A4Y4 181 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 OOEPA6NGQ2 149 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 A6NIN4 97 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 OR5B21A6NL26 309 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 OR4C45A6NMZ5 311 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 A8MXK9 166 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 TRAPPC2LH3BP13 241 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 HTR1AP08908 422 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 FAM157CP0CG43 387 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 UBCP0CG48 685 aaKnown RBP9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 MUC1P15941 1255 aaPredicted RBP9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 ZNF12P17014 697 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 ETV1P50549 477 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 MRPL28Q13084 256 aaKnown RBP9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 RIPK1Q13546 671 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 ALKBH1Q13686 389 aaKnown RBP9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 MICBQ29980 383 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 KRTAP21-3Q3LHN1 58 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 ESCO2Q56NI9 601 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 KCTD8Q6ZWB6 473 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 OR10Z1Q8NGY1 313 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 ZNF671Q8TAW3 534 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 LRRC29Q8WV35 223 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 GGHQ92820 318 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 NEIL1Q96FI4 390 aaPredicted RBP9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 KAAG1Q9UBP8 84 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 LRCH1Q9Y2L9 728 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 CAB39Q9Y376 341 aaPredicted RBP9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 JMJD1CQ15652 2540 aa9.31□□□□□ -0.92
SCARNA20-201ENST00000516768 A0A0G2JMP0 313 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 A0A0X1KG70 313 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 PQLC2LA1A4F0 135 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 KIAA1324LA8MWY0 1029 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 SRRM5B3KS81 715 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 E9PI62 339 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 H0YHG0 523 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 J3QLI3 93 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 PHF1O43189 567 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 RHBDL1O75783 438 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 SERPINA3P01011 423 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 AVPP01185 164 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 RPSAP08865 295 aaKnown RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 RPS2P15880 293 aaKnown RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 HNF1AP20823 631 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 CD80P33681 288 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 TGM4P49221 684 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 GBX2P52951 348 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 PAX2Q02962 417 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 ST3GAL4Q11206 333 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 UBE2V2Q15819 145 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 ATPAF1Q5TC12 328 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 DCAF12L2Q5VW00 463 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 PLCXD3Q63HM9 321 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 C1orf229Q6ZS94 237 aaPredicted RBP9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 NLRC3Q7RTR2 1065 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 FAM90A1Q86YD7 464 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 OR4M2Q8NGB6 313 aa9.3□□□□□ -0.92
SCARNA20-201ENST00000516768 OR8B3Q8NGG8 313 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms