RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 NCF1CA8MVU1 366 aaPredicted RBP3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 LCA5LO95447 670 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 IL3RAP26951 378 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 CD34P28906 385 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 SPAG1Q07617 926 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 TSC22D1Q15714 1073 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 SP6Q3SY56 376 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 ULK3Q6PHR2 472 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 BRD3OSQ6XYD6 125 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 MRPL21Q7Z2W9 205 aaKnown RBP3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 SGPP2Q8IWX5 399 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 PROKR2Q8NFJ6 384 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 NAPGQ99747 312 aaPredicted RBP3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 SEC22CQ9BRL7 303 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 TTC41PQ6P2S7 1318 aa3.09□□□□□ -1.91
SNORA48.9-201ENST00000516419 PLEKHG2Q9H7P9 1386 aa3.09□□□□□ -1.92
SNORA48.9-201ENST00000516419 JCADQ9P266 1359 aa3.09□□□□□ -1.92
SNORA48.9-201ENST00000516419 HIVEP2P31629 2446 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 TTC4O95801 387 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 ARL2P36404 184 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 BBS7Q8IWZ6 715 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 RNF10Q8N5U6 811 aaKnown RBP3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 PIH1D2Q8WWB5 315 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 CERS2Q96G23 380 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 PDCD1LG2Q9BQ51 273 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 SHANK2-AS3Q9BTD1 123 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 BLZF1Q9H2G9 400 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 CHRAC1Q9NRG0 131 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 PEF1Q9UBV8 284 aaKnown RBP3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 RWDD2AQ9UIY3 292 aa3.08□□□□□ -1.92
SNORA48.9-201ENST00000516419 IGHV6-1A0A0B4J1U7 121 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 PFN1P07737 140 aaKnown RBP3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 COL8A2P25067 703 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 KLHL40Q2TBA0 621 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 HHATQ5VTY9 493 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 MLIPQ5VWP3 458 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 MORN3Q6PF18 240 aaPredicted RBP3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 ISG20Q96AZ6 181 aaKnown RBP3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 TVP23CQ96ET8 276 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 OR51B5Q9H339 312 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 HMGXB4Q9UGU5 601 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 PSME2Q9UL46 239 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 RHBDD3Q9Y3P4 386 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 NID2Q14112 1375 aa3.07□□□□□ -1.92
SNORA48.9-201ENST00000516419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 SLC35G6P0C7Q6 338 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 PMCHP20382 165 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 GABRR2P28476 465 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 DAOAP59103 153 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 SLC35A1P78382 337 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 LCN2P80188 198 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 PRKCDQ05655 676 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 BAMBIQ13145 260 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 ZNF235Q14590 738 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 MAPRE2Q15555 327 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 HIKESHIQ53FT3 197 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 TTC19Q6DKK2 380 aaPredicted RBP3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 ZFAND6Q6FIF0 208 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 DAZ4Q86SG3 579 aaKnown RBP3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 SLC7A5P1Q8MH63 180 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 TBL1XR1Q9BZK7 514 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 ARV1Q9H2C2 271 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 NCOR1P1Q9H4R4 102 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 DAZ1Q9NQZ3 744 aaKnown RBP3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 TMEM100Q9NV29 134 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 VAX2Q9UIW0 290 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
SNORA48.9-201ENST00000516419 LOC102724200A0A096LPH7 203 aaPredicted RBP3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 ARPC4-TTLL3A0A0A6YYG9 625 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 IGKV1-6A0A0C4DH72 117 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 TMEM72A0PK05 275 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 TRDMT1O14717 391 aaKnown RBP3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 IGKV1-39P01597 117 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 IGKV1D-39P04432 117 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 KLK1P06870 262 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 HLA-DMAP28067 261 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 TGM4P49221 684 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 PSMD4P55036 377 aaKnown RBP3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 MTPNP58546 118 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 PAFAH1B2P68402 229 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 C2orf54Q08AI8 447 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 TAF9Q16594 264 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 SPIN3Q5JUX0 258 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 TMEM69Q5SWH9 247 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 FAM104BQ5XKR9 115 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 Q96MT0 163 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 IL22Q9GZX6 179 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 ARMC7Q9H6L4 198 aa3.05□□□□□ -1.92
SNORA48.9-201ENST00000516419 RPRD2Q5VT52 1461 aaKnown RBP3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 NPHP4O75161 1426 aaPredicted RBP3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 SBNO1A3KN83 1393 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 A0A0G2JMP0 313 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 A0A0X1KG70 313 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 GOLGA6L4A6NEF3 574 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 CLDN34H7C241 214 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 ZNF701M0R085 212 aaPredicted RBP3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 IGHV1-46P01743 117 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 P0C880 135 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 TUBG1P23258 451 aa3.04□□□□□ -1.92
SNORA48.9-201ENST00000516419 TRDNQ13061 729 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms