RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 IGHV3OR15-7A0A075B7D8 119 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 A0A0U1RQK1 487 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 NKX6-3A6NJ46 265 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 TMEM210A6NLX4 147 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 GPR137BO60478 399 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 DCTN3O75935 186 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 CLPXO76031 633 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PAHP00439 452 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 GASTP01350 101 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 IGHV4-59P01825 116 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 GYPBP06028 91 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PAICSP22234 425 aaKnown RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 MSX2P35548 267 aaPredicted RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 MAGEA2P43356 314 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 IER3P46695 156 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 FAM3AP98173 230 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 EIF2B1Q14232 305 aaKnown RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 GK3PQ14409 553 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 TAF9Q16594 264 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 WDR38Q5JTN6 314 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 ZNF770Q6IQ21 691 aaPredicted RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 WDR82Q6UXN9 313 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 FAM57BQ71RH2 274 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 VMO1Q7Z5L0 202 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 ERI1Q8IV48 349 aaKnown RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 DEFB107AQ8IZN7 70 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 ARHGAP24Q8N264 748 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 GALNT4Q8N4A0 578 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 AQP11Q8NBQ7 271 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PAPD5Q8NDF8 572 aaKnown RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 OR9Q2Q8NGE9 314 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 OR8D4Q8NGM9 314 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 OR10Z1Q8NGY1 313 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 LINC01006Q8NI28 216 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 RNF133Q8WVZ7 376 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 ZNRF4Q8WWF5 429 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 SGK3Q96BR1 496 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 MED30Q96HR3 178 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PGAM5Q96HS1 289 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 HIST1H2AAQ96QV6 131 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 INTS14Q96SY0 518 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 CCL13Q99616 98 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 RTL8AQ9BWD3 113 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PAPOLGQ9BWT3 736 aaKnown RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 DGCR6LQ9BY27 220 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 MUC13Q9H3R2 512 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 MAGIXQ9H6Y5 334 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 REEP1Q9H902 201 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 CMC2Q9NRP2 79 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PDP1Q9P0J1 537 aaPredicted RBP5.91□□□□□ -1.46
USP46-208ENST00000512656 ACTR3BQ9P1U1 418 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 DNAJB11Q9UBS4 358 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 ZNF391Q9UJN7 358 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 MPC1Q9Y5U8 109 aa5.91□□□□□ -1.46
USP46-208ENST00000512656 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 hCG_38984A0A1B0GV85 526 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 C5orf63A6NC05 138 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 CDIPTO14735 213 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 ATP8B1O43520 1251 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 GLCEO94923 617 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 H2BFMP0C1H6 154 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 TGFBR2P37173 567 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 TGM4P49221 684 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 ZNF121P58317 390 aaPredicted RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 HOXA4Q00056 320 aaPredicted RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 SRSF4Q08170 494 aaKnown RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 BLMHQ13867 455 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 MICAQ29983 383 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 GFOD2Q3B7J2 385 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 FAM98BQ52LJ0 330 aaKnown RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 ATPAF1Q5TC12 328 aaPredicted RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 NCR3LG1Q68D85 454 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 DHRS7BQ6IAN0 325 aaPredicted RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 OR2T5Q6IEZ7 315 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 METAP1DQ6UB28 335 aaPredicted RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 C1orf122Q6ZSJ8 110 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 C11orf53Q8IXP5 236 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 PDZD9Q8IXQ8 264 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 DTX3Q8N9I9 347 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 ZSCAN4Q8NAM6 433 aaPredicted RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 LY6G5BQ8NDX9 201 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 OR6N2Q8NGY6 317 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 OR2T29Q8NH02 315 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 OR4Q3Q8NH05 313 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 OR5R1Q8NH85 324 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 TEX47Q8TBZ9 253 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 H1FXQ92522 213 aaKnown RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 ITFG2Q969R8 447 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 OTULINQ96BN8 352 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 C8orf49Q96NF6 230 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 DCTN5Q9BTE1 182 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 ABHD6Q9BV23 337 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 TLNRD1Q9H1K6 362 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 C16orf95Q9H693 158 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 NIPAL2Q9H841 368 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 TCF7L1Q9HCS4 588 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 HAO2Q9NYQ3 351 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 DNAJC27Q9NZQ0 273 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms