RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RNF170Q96K19 258 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 INTS14Q96SY0 518 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 DGCR6LQ9BY27 220 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 DNTTIP1Q9H147 329 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 OR51I2Q9H344 312 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 CMC2Q9NRP2 79 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 NLKQ9UBE8 527 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 U3KQV3 271 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 ANKRD61A6NGH8 418 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 SNX3O60493 162 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 GMNNO75496 209 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 NDUFB7P17568 137 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 HSD11B1P28845 292 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 GSTT1P30711 240 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 SLC15A1P46059 708 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 MS4A2Q01362 244 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 ACSM1Q08AH1 577 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 SAMD4BQ5PRF9 694 aaKnown RBP12.91□□□□□ -0.34
RAB40C-202ENST00000509637 Q6ZS46 218 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 KRT74Q7RTS7 529 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 TMEM179BQ7Z7N9 219 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 CD177Q8N6Q3 437 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 CSNK2A3Q8NEV1 391 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 OR5R1Q8NH85 324 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 WIPF2Q8TF74 440 aaPredicted RBP12.91□□□□□ -0.34
RAB40C-202ENST00000509637 ZNF488Q96MN9 340 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 MICU1Q9BPX6 476 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 OR10A2Q9H208 303 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
RAB40C-202ENST00000509637 YY1AP1Q9H869 796 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 SERTAD4Q9NUC0 356 aa12.91□□□□□ -0.34
RAB40C-202ENST00000509637 CAB39Q9Y376 341 aaPredicted RBP12.91□□□□□ -0.34
RAB40C-202ENST00000509637 GLCEO94923 617 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 GABRA2P47869 451 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 GPM6AP51674 278 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 BMXP51813 675 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 IL5RAQ01344 420 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 FAM189A2Q15884 450 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 MICAQ29983 383 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 LHFPL4Q7Z7J7 247 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 DEFB107AQ8IZN7 70 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 OR2T33Q8NG76 320 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 OR52H1Q8NGJ2 320 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 RTL8AQ9BWD3 113 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 OR51V1Q9H2C8 321 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 ZNF702PQ9H963 129 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 BAIAP2Q9UQB8 552 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 MPC1Q9Y5U8 109 aa12.9□□□□□ -0.34
RAB40C-202ENST00000509637 BTBD17A6NE02 478 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 ANGPTL7O43827 346 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 PAHP00439 452 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 H2BFMP0C1H6 154 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 CD28P10747 220 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 JUNBP17275 347 aaPredicted RBP12.89□□□□□ -0.35
RAB40C-202ENST00000509637 GNALP38405 381 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 CEBPDP49716 269 aaPredicted RBP12.89□□□□□ -0.35
RAB40C-202ENST00000509637 RAB13P51153 203 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 BBS1Q8NFJ9 593 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 OTOSQ8NHW6 89 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 MED30Q96HR3 178 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 FAM107BQ9H098 131 aa12.89□□□□□ -0.35
RAB40C-202ENST00000509637 A0A1W2PQ09 198 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 TMEM210A6NLX4 147 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 ZNF732B4DXR9 585 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 PSMD9O00233 223 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 CCL3L1P16619 93 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 GLRA1P23415 457 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 POU1F1P28069 291 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 LRRC75BQ2VPJ9 315 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 NCR3LG1Q68D85 454 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 CD300LDQ6UXZ3 194 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 Q6ZTK2 550 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 KCTD8Q6ZWB6 473 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 THEM6Q8WUY1 208 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 AQP3Q92482 292 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 SDSLQ96GA7 329 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 MMP28Q9H239 520 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 ACTR3BQ9P1U1 418 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 ZNF281Q9Y2X9 895 aa12.88□□□□□ -0.35
RAB40C-202ENST00000509637 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
RAB40C-202ENST00000509637 NKX6-3A6NJ46 265 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 FAM90A8PA6NJQ4 464 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 RIIAD1A6NNX1 92 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 SYNGR1O43759 233 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 MTRF1O75570 445 aaKnown RBP12.87□□□□□ -0.35
RAB40C-202ENST00000509637 IGLV3-1P01715 115 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 ALOX5APP20292 161 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 SLC2A5P22732 501 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 CFL1P23528 166 aaKnown RBP12.87□□□□□ -0.35
RAB40C-202ENST00000509637 DLX6P56179 175 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 ZNF273Q14593 569 aa12.87□□□□□ -0.35
RAB40C-202ENST00000509637 OR2T5Q6IEZ7 315 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms