RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 DYRK2Q92630 601 aa12.92□□□□□ -0.34
PHF3-209ENST00000509330 BORCS8Q96FH0 119 aa12.92□□□□□ -0.34
PHF3-209ENST00000509330 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
PHF3-209ENST00000509330 C1QTNF6Q9BXI9 259 aa12.92□□□□□ -0.34
PHF3-209ENST00000509330 PTPRBP23467 1997 aa12.92□□□□□ -0.34
PHF3-209ENST00000509330 ARPC4-TTLL3A0A0A6YYG9 625 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 ZNF850A8MQ14 1090 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 ACTL6AO96019 429 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 NRASP01111 189 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 PRF1P14222 555 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 HIST1H1DP16402 221 aaKnown RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 LAMTOR1Q6IAA8 161 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 NLRC3Q7RTR2 1065 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 TMEM229BQ8NBD8 167 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 CST11Q9H112 138 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 ERP29P30040 261 aaKnown RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 ASCL5Q7RTU5 278 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 ASCC1Q8N9N2 400 aaKnown RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 ZNF431Q8TF32 576 aaPredicted RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 PAPOLGQ9BWT3 736 aaKnown RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 ZDHHC11Q9H8X9 412 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 SCPEP1Q9HB40 452 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 ZNF701Q9NV72 531 aaPredicted RBP12.91□□□□□ -0.34
PHF3-209ENST00000509330 PTTG3PQ9NZH4 202 aa12.91□□□□□ -0.34
PHF3-209ENST00000509330 SDCBPO00560 298 aaPredicted RBP12.9□□□□□ -0.34
PHF3-209ENST00000509330 KLK10O43240 276 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 EFSO43281 561 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 LYZL6O75951 148 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 RAG2P55895 527 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 RNPS1Q15287 305 aaKnown RBP12.9□□□□□ -0.34
PHF3-209ENST00000509330 OR56B2PQ8NGI1 322 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 DEDD2Q8WXF8 326 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 SNAPC3Q92966 411 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 ZNF436Q9C0F3 470 aaPredicted RBP12.9□□□□□ -0.34
PHF3-209ENST00000509330 DLL4Q9NR61 685 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 IGHV3-64DA0A0J9YX35 117 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 hCG_38984A0A1B0GV85 526 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 TMEM82A0PJX8 343 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 FAM221AA4D161 298 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 SULT1C2O00338 296 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 GOSR2O14653 212 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 NOS1APO75052 506 aaPredicted RBP12.9□□□□□ -0.34
PHF3-209ENST00000509330 ZNF205O95201 554 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 IL18BPO95998 194 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 ZNF735P0CB33 412 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 RSU1Q15404 277 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 C11orf88Q6PI97 169 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.34
PHF3-209ENST00000509330 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
PHF3-209ENST00000509330 MEIKINA0A087WXM9 373 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 A0A0A6YYH2 397 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 A6NJ64 397 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 ARID1AO14497 2285 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 CSTBP04080 98 aaKnown RBP12.9□□□□□ -0.35
PHF3-209ENST00000509330 CEACAM1P13688 526 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 PI3P19957 117 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 DNASE1P24855 282 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.35
PHF3-209ENST00000509330 PIGYQ3MUY2 71 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 ZNF626Q68DY1 528 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 ALKBH2Q6NS38 261 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 ZFAND1Q8TCF1 268 aa12.9□□□□□ -0.35
PHF3-209ENST00000509330 RYDENQ9NUL5 291 aaKnown RBP12.9□□□□□ -0.35
PHF3-209ENST00000509330 ZNF724A8MTY0 619 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 PRAF2O60831 178 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 CAPZA1P52907 286 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 BAMBIQ13145 260 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 GK2Q14410 553 aaPredicted RBP12.89□□□□□ -0.35
PHF3-209ENST00000509330 OR56B1Q8NGI3 324 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 OR4K15Q8NH41 348 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 CCDC120Q96HB5 630 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 LINC00470Q9BZP3 86 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
PHF3-209ENST00000509330 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 STARD10Q9Y365 291 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 BSNQ9UPA5 3926 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 IFNA6P05013 189 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 CELA3BP08861 270 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 IL32P24001 234 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
PHF3-209ENST00000509330 SLC36A1Q7Z2H8 476 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 OR2W3Q7Z3T1 314 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 MYPOPQ86VE0 399 aaPredicted RBP12.89□□□□□ -0.35
PHF3-209ENST00000509330 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 VSIG4Q9Y279 399 aa12.89□□□□□ -0.35
PHF3-209ENST00000509330 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 TPPPO94811 219 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 CHRM2P08172 466 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 RBP2P50120 134 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 MICBQ29980 383 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms