RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 M0R3H8 397 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 AP4M1O00189 453 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 BHLHE40O14503 412 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 RFXANKO14593 260 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 XKRYO14609 159 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CDIPTO14735 213 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 OVOL1O14753 267 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 SERPINB7O75635 380 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 OR2F2O95006 317 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 FGF4P08620 206 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ACAA1P09110 424 aaPredicted RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 SELLP14151 372 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 PTMSP20962 102 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CD24P25063 80 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 AQP2P41181 271 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CDX1P47902 265 aaPredicted RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 ENTPD1P49961 510 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 PTTG1IPP53801 180 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CAV3P56539 151 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 RAP1BP61224 184 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 RAP1AP62834 184 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 SPIBQ01892 262 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 EMX2Q04743 252 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 RPL18Q07020 188 aaKnown RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 AQP6Q13520 282 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 FHL3Q13643 280 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ENDOGQ14249 297 aaKnown RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 DGUOKQ16854 277 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 TIGD6Q17RP2 521 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CCDC153Q494R4 210 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 SPANXN4Q5MJ08 99 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 LGALS9CQ6DKI2 356 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 GPR139Q6DWJ6 353 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 ACP7Q6ZNF0 438 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 TIFABQ6ZNK6 161 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ZNF788Q6ZQV5 615 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 TMPRSS11FQ6ZWK6 438 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 LYPD6Q86Y78 171 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 MAPKAPK5-AS1Q8N8E1 139 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 GJC3Q8NFK1 279 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 OR1N2Q8NGR9 330 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 OR5K1Q8NHB7 308 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 SEH1LQ96EE3 360 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 NOL4LQ96MY1 436 aaPredicted RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 RBM14Q96PK6 669 aaKnown RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 OR52E6Q96RD3 313 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ZBTB18Q99592 522 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 SEPHS2Q99611 448 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 MCHR1Q99705 422 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 HIPK2Q9H2X6 1198 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 RAD21L1Q9H4I0 556 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ZCCHC4Q9H5U6 513 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 CCDC134Q9H6E4 229 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 ELL3Q9HB65 397 aaPredicted RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 RETNQ9HD89 108 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 MRPS18AQ9NVS2 196 aaKnown RBP3.01□□□□□ -1.93
RNF4-211ENST00000509206 NINJ2Q9NZG7 142 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 RPS6KA6Q9UK32 745 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 A4GNTQ9UNA3 340 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 GTF2A1LQ9UNN4 478 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 PPP2R2CQ9Y2T4 447 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 N6AMT1Q9Y5N5 214 aa3.01□□□□□ -1.93
RNF4-211ENST00000509206 A0A087WUV0 522 aaPredicted RBP3□□□□□ -1.93
RNF4-211ENST00000509206 LOC102723971A0A1B0GUV8 181 aa3□□□□□ -1.93
RNF4-211ENST00000509206 A0A1B0GWJ7 208 aa3□□□□□ -1.93
RNF4-211ENST00000509206 CPSF4LA6NMK7 179 aaKnown RBP3□□□□□ -1.93
RNF4-211ENST00000509206 FAM90A22PA8MWA6 464 aa3□□□□□ -1.93
RNF4-211ENST00000509206 A8MZ25 164 aa3□□□□□ -1.93
RNF4-211ENST00000509206 RAB27BO00194 218 aa3□□□□□ -1.93
RNF4-211ENST00000509206 CCRL2O00421 344 aa3□□□□□ -1.93
RNF4-211ENST00000509206 SLC22A2O15244 555 aa3□□□□□ -1.93
RNF4-211ENST00000509206 RER1O15258 196 aa3□□□□□ -1.93
RNF4-211ENST00000509206 SIGLEC5O15389 551 aa3□□□□□ -1.93
RNF4-211ENST00000509206 XRCC3O43542 346 aa3□□□□□ -1.93
RNF4-211ENST00000509206 CHP2O43745 196 aa3□□□□□ -1.93
RNF4-211ENST00000509206 TRIM13O60858 407 aa3□□□□□ -1.93
RNF4-211ENST00000509206 PTP4A3O75365 173 aa3□□□□□ -1.93
RNF4-211ENST00000509206 INMTO95050 263 aa3□□□□□ -1.93
RNF4-211ENST00000509206 CNIH1O95406 144 aa3□□□□□ -1.93
RNF4-211ENST00000509206 BRI3O95415 125 aa3□□□□□ -1.93
RNF4-211ENST00000509206 PTBP3O95758 552 aaKnown RBP3□□□□□ -1.93
RNF4-211ENST00000509206 SERPINA1P01009 418 aa3□□□□□ -1.93
RNF4-211ENST00000509206 C1QCP02747 245 aa3□□□□□ -1.93
RNF4-211ENST00000509206 ASAH2BP0C7U1 165 aa3□□□□□ -1.93
RNF4-211ENST00000509206 FAM106CPP0CH98 169 aa3□□□□□ -1.93
RNF4-211ENST00000509206 CCL3L1P16619 93 aa3□□□□□ -1.93
RNF4-211ENST00000509206 BTF3P20290 206 aaKnown RBP3□□□□□ -1.93
RNF4-211ENST00000509206 GLRA1P23415 457 aa3□□□□□ -1.93
RNF4-211ENST00000509206 GCSHP23434 173 aa3□□□□□ -1.93
RNF4-211ENST00000509206 HTR1DP28221 377 aa3□□□□□ -1.93
RNF4-211ENST00000509206 SLC7A2P52569 658 aa3□□□□□ -1.93
RNF4-211ENST00000509206 TPTEP56180 551 aa3□□□□□ -1.93
RNF4-211ENST00000509206 NME5P56597 212 aa3□□□□□ -1.93
RNF4-211ENST00000509206 RPL27P61353 136 aaKnown RBP3□□□□□ -1.93
RNF4-211ENST00000509206 GPR50Q13585 617 aa3□□□□□ -1.93
RNF4-211ENST00000509206 MAPK11Q15759 364 aa3□□□□□ -1.93
RNF4-211ENST00000509206 CCDC92Q53HC0 331 aaPredicted RBP3□□□□□ -1.93
RNF4-211ENST00000509206 ALG10Q5BKT4 473 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms