RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 WRAP73Q9P2S5 460 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-210ENST00000508216 A0A1W2PRU2 124 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 GABRDO14764 452 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TNFRSF13BO14836 293 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 B4GALT2O60909 372 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 OPN1SWP03999 348 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CSTBP04080 98 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ZNF286BP0CG31 522 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ST6GAL1P15907 406 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 EN2P19622 333 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TCN2P20062 427 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 RPS14P62263 151 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CDC42EP1Q00587 391 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TLE3Q04726 772 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 EXT1Q16394 746 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TM4SF20Q53R12 229 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 PLCXD3Q63HM9 321 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TRAT1Q6PIZ9 186 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM182Q6ZP80 229 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 COX15Q7KZN9 410 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM130Q8N3G9 435 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SUSD6Q92537 303 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 BTF3L4Q96K17 158 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TSPAN32Q96QS1 320 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ARHGDIGQ99819 225 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CITED1Q99966 193 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 MFSD1Q9H3U5 465 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ZDHHC6Q9H6R6 413 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TVP23BQ9NYZ1 205 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 GULP1Q9UBP9 304 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC7A7Q9UM01 511 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 RFNGQ9Y644 331 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 IGSF23A1L1A6 192 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SERINC4A6NH21 518 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 PDE6DO43924 150 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CD22P20273 847 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CLDN15P56746 228 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 PIGPP57054 158 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 TAS2R30P59541 319 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 RPL23AP62750 156 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ARG2P78540 354 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 HLA-DRB3P79483 266 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 RUNX1Q01196 453 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ZP4Q12836 540 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ATXN7L3Q14CW9 347 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 C4orf17Q53FE4 359 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 C5orf47Q569G3 176 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 ENTPD8Q5MY95 495 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 LEG1Q6P5S2 330 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CEACAM19Q7Z692 300 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CENPVQ7Z7K6 275 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC25A42Q86VD7 318 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 C1orf174Q8IYL3 243 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 CFAP52Q8N1V2 620 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 GPR32P1Q8NGA4 272 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 OR4N2Q8NGD1 307 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 MFSD8Q8NHS3 518 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC2A12Q8TD20 617 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 HMGB4Q8WW32 186 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 AQP3Q92482 292 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SDSLQ96GA7 329 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 LINC00470Q9BZP3 86 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 GPR27Q9NS67 375 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 FBXW11Q9UKB1 542 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 SLC17A4Q9Y2C5 497 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 B3GALT1Q9Y5Z6 326 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 URGCP-MRPS24S4R325 110 aa9.58□□□□□ -0.88
PDLIM5-210ENST00000508216 BRWD3Q6RI45 1802 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 PIKFYVEQ9Y2I7 2098 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 G3V3Y1 287 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 HYPMO75409 117 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 CR2P20023 1033 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 HTR1FP30939 366 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 BUD31P41223 144 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 HTR6P50406 440 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 TAS2R20P59543 309 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 PLAURQ03405 335 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 EGR4Q05215 589 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 SRSF6Q13247 344 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 OLIG2Q13516 323 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 TMEM240Q5SV17 173 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 ESPNLQ6ZVH7 1005 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 C1orf210Q8IVY1 113 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 NXPE1Q8N323 547 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 ZDHHC22Q8N966 263 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 C5orf17Q8NAS9 161 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 OR2Y1Q8NGV0 311 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 SPATA25Q9BR10 227 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 FRRS1LQ9P0K9 344 aa9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 NOP16Q9Y3C1 178 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-210ENST00000508216 CEP350Q5VT06 3117 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 TTC3P53804 2025 aa9.56□□□□□ -0.88
PDLIM5-210ENST00000508216 IGKV6D-41A0A0C4DH26 115 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms