RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 COL10A1Q03692 680 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 LDLRAD2Q5SZI1 272 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 CGB2Q6NT52 195 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 FTMTQ8N4E7 242 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
SNF8-205ENST00000507302 RNF133Q8WVZ7 376 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 NKX3-1Q99801 234 aaPredicted RBP13.23□□□□□ -0.29
SNF8-205ENST00000507302 IL20Q9NYY1 176 aa13.23□□□□□ -0.29
SNF8-205ENST00000507302 DYNC2H1Q8NCM8 4307 aaKnown RBP13.22□□□□□ -0.29
SNF8-205ENST00000507302 ODF3BA8MYP8 253 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 RHBDL1O75783 438 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 GLCEO94923 617 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 GADD45GO95257 159 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 APOC1P02654 83 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 SPARCP09486 303 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 POU1F1P28069 291 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 FMO3P31513 532 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 MSX2P35548 267 aaPredicted RBP13.22□□□□□ -0.29
SNF8-205ENST00000507302 SLC25A1P53007 311 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 GMFBP60983 142 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 SLC35A2P78381 396 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 PRDX4Q13162 271 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 TAF13Q15543 124 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 LINC01590Q5TEZ4 76 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 HACD2Q6Y1H2 254 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 LHFPL4Q7Z7J7 247 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 CALHM1Q8IU99 346 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 ZNF511Q8NB15 262 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 OR51L1Q8NGJ5 315 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 PITPNC1Q9UKF7 332 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 TBL2Q9Y4P3 447 aaKnown RBP13.22□□□□□ -0.29
SNF8-205ENST00000507302 N6AMT1Q9Y5N5 214 aa13.22□□□□□ -0.29
SNF8-205ENST00000507302 HMGB1P1B2RPK0 211 aaPredicted RBP13.21□□□□□ -0.29
SNF8-205ENST00000507302 NDUFAB1O14561 156 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 MTRF1O75570 445 aaKnown RBP13.21□□□□□ -0.29
SNF8-205ENST00000507302 ANXA2P07355 339 aaKnown RBP13.21□□□□□ -0.29
SNF8-205ENST00000507302 GLRA1P23415 457 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 OPRL1P41146 370 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 RAB13P51153 203 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 DLX6P56179 175 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 ZNF121P58317 390 aaPredicted RBP13.21□□□□□ -0.29
SNF8-205ENST00000507302 BLCAPP62952 87 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 RPL13AP3Q6NVV1 102 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 FAM57BQ71RH2 274 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 RPS4Y2Q8TD47 263 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 MALSU1Q96EH3 234 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 OR51I2Q9H344 312 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 SAMD4AQ9UPU9 718 aaKnown RBP13.21□□□□□ -0.29
SNF8-205ENST00000507302 CDH10Q9Y6N8 788 aa13.21□□□□□ -0.29
SNF8-205ENST00000507302 A0A1W2PPH5 198 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 ZNF850A8MQ14 1090 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 C17orf98A8MV24 154 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 SPI1P17947 270 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 IFNGR2P38484 337 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 GABRA2P47869 451 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 LGALS4P56470 323 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 RPL31P62899 125 aaKnown RBP13.2□□□□□ -0.3
SNF8-205ENST00000507302 KRT72Q14CN4 511 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 DEFB121Q5J5C9 76 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 TMEM185AQ8NFB2 350 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 OR5AU1Q8NGC0 362 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 FOXRED1Q96CU9 486 aaPredicted RBP13.2□□□□□ -0.3
SNF8-205ENST00000507302 RNF170Q96K19 258 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 ABHD6Q9BV23 337 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 OR10A2Q9H208 303 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 MUC13Q9H3R2 512 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 RASL12Q9NYN1 266 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
SNF8-205ENST00000507302 FAM90A22PA8MWA6 464 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 SYNGR1O43759 233 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 ALDOBP05062 364 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 HMGA2P52926 109 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 BLVRAP53004 296 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 CD69Q07108 199 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 ZNF626Q68DY1 528 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 GLYATQ6IB77 296 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 THAP5Q7Z6K1 395 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 TMEM219Q86XT9 240 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 CD177Q8N6Q3 437 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 OR8D4Q8NGM9 314 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 ITFG2Q969R8 447 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 LYZL4Q96KX0 146 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 AMELYQ99218 206 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 KCTD14Q9BQ13 255 aaPredicted RBP13.19□□□□□ -0.3
SNF8-205ENST00000507302 GORASP2Q9H8Y8 452 aa13.19□□□□□ -0.3
SNF8-205ENST00000507302 hCG_1809904A0A1W2PP81 198 aa13.18□□□□□ -0.3
SNF8-205ENST00000507302 A0A1W2PPE2 198 aa13.18□□□□□ -0.3
SNF8-205ENST00000507302 A0A1W2PR64 198 aa13.18□□□□□ -0.3
SNF8-205ENST00000507302 A0A1W2PRV1 198 aa13.18□□□□□ -0.3
SNF8-205ENST00000507302 RBP4P02753 201 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms