RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ZNF879B4DU55 563 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 M0QX08 132 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 HLA-HP01893 362 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 APOA1P02647 267 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 UBCP0CG48 685 aaKnown RBP1.76□□□□□ -2.13
SUB1-204ENST00000504016 LGALS3P17931 250 aaKnown RBP1.76□□□□□ -2.13
SUB1-204ENST00000504016 PCK1P35558 622 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 AP1S2P56377 157 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 RAB11AP62491 216 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 TFDP2Q14188 446 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 ITIH4Q14624 930 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 RAB11BQ15907 218 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 CCL15Q16663 113 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 NKAIN1Q4KMZ8 207 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 LINC00523Q86TU6 105 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 OFCC1Q8IZS5 231 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 PQLC3Q8N755 202 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 GPX8Q8TED1 209 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 ASZ1Q8WWH4 475 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 APH1AQ96BI3 265 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 JSRP1Q96MG2 331 aaPredicted RBP1.76□□□□□ -2.13
SUB1-204ENST00000504016 BCL7BQ9BQE9 202 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 TM2D3Q9BRN9 247 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 SIKE1Q9BRV8 207 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 MRPS30Q9NP92 439 aaKnown RBP1.76□□□□□ -2.13
SUB1-204ENST00000504016 MCUBQ9NWR8 336 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 IFNKQ9P0W0 207 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 ZNF492Q9P255 531 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 RAB22AQ9UL26 194 aa1.76□□□□□ -2.13
SUB1-204ENST00000504016 KCNE1BA0A087WTH5 132 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 TRAV25A0A0B4J276 109 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 ZNF701M0R085 212 aaPredicted RBP1.75□□□□□ -2.13
SUB1-204ENST00000504016 HSBP1O75506 76 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 IGKV1-39P01597 117 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 MAS1P04201 325 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 IGKV1D-39P04432 117 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 IVLP07476 585 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 THRAP10827 490 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 NELFEP18615 380 aaKnown RBP1.75□□□□□ -2.13
SUB1-204ENST00000504016 CLDN8P56748 225 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 DAOAP59103 153 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 IRF8Q02556 426 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 HSP90B2PQ58FF3 399 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 MFSD14CQ5VZR4 134 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 PDPNQ86YL7 162 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 PDCL2Q8N4E4 241 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 SLC25A29Q8N8R3 303 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 MSANTD3Q96H12 275 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 ALS2CR12Q96Q35 445 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 GPR21Q99679 349 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 NAA50Q9GZZ1 169 aaKnown RBP1.75□□□□□ -2.13
SUB1-204ENST00000504016 ELOVL6Q9H5J4 265 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 ZC4H2Q9NQZ6 224 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 TBC1D24Q9ULP9 559 aa1.75□□□□□ -2.13
SUB1-204ENST00000504016 BZW2Q9Y6E2 419 aaKnown RBP1.75□□□□□ -2.13
SUB1-204ENST00000504016 PIK3R4Q99570 1358 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 A0A1W2PRD5 423 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 C4orf51C9J302 202 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 ZNF878C9JN71 531 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 BOLA2-SMG1P6H3BVE0 249 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 YKT6O15498 198 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 ERI3O43414 337 aaKnown RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 CCDC22O60826 627 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 SCELO95171 688 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 SNAI1O95863 264 aaPredicted RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 PTTG1O95997 202 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 NRASP01111 189 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 HRASP01112 189 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 KRASP01116 189 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 MMP7P09237 267 aaPredicted RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 STAG3L2P0CL84 134 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 HOXB8P17481 243 aaPredicted RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 CPN2P22792 545 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 HLA-DMAP28067 261 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 OR1G1P47890 313 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 BCAP31P51572 246 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 DMTNQ08495 405 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 BIKQ13323 160 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 OR1Q1Q15612 314 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 USF2Q15853 346 aaPredicted RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 HNRNPA1L2Q32P51 320 aaKnown RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 HCP5Q6MZN7 132 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 RWDD4Q6NW29 188 aaKnown RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 WDR82Q6UXN9 313 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 SLC30A8Q8IWU4 369 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 OR5T3Q8NGG3 340 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
SUB1-204ENST00000504016 ATP6V1G3Q96LB4 118 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 EMC6Q9BV81 110 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 SFXN3Q9BWM7 321 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 MS4A8Q9BY19 250 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 DSN1Q9H410 356 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 PLEKHF2Q9H8W4 249 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 R4GN34 69 aa1.74□□□□□ -2.13
SUB1-204ENST00000504016 C17orf51A8MQB3 221 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 CENPXA8MT69 81 aa1.73□□□□□ -2.13
SUB1-204ENST00000504016 K7ERQ8 282 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms