RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 FAM157AC9JC47 383 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 LRP3O75074 770 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 DEDDO75618 318 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 DHRS3O75911 302 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 APOC1P02654 83 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 SLC2A1P11166 492 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 PI3P19957 117 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 LPAR6P43657 344 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 C10orf128Q5T292 105 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 RPL7L1Q6DKI1 246 aaKnown RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 OPN5Q6U736 354 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 TMEM200AQ86VY9 491 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 GJC3Q8NFK1 279 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 OR2M3Q8NG83 312 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 WDR77Q9BQA1 342 aaPredicted RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 CHST5Q9GZS9 411 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 PLEKHA2Q9HB19 425 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 OR2S2Q9NQN1 319 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 SHISA8B8ZZ34 492 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 K7EPK0 472 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 MED6O75586 246 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 ZFAND5O76080 213 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 CRYBA1P05813 215 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 HPNP05981 417 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 CYC1P08574 325 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 RPL12P30050 165 aaKnown RBP13.15□□□□□ -0.3
SNF8-203ENST00000504000 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
SNF8-203ENST00000504000 B2MP61769 119 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 HIST1H3AP68431 136 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 NKAIN1Q4KMZ8 207 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 HIST2H3PS2Q5TEC6 136 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 SHISA6Q6ZSJ9 500 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 HIST2H3AQ71DI3 136 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 SGPP2Q8IWX5 399 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 FAM71E2Q8N5Q1 922 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 C15orf54Q8N8G6 183 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 FADS6Q8N9I5 356 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 SHDQ96IW2 340 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 ARV1Q9H2C2 271 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 SMCO4Q9NRQ5 59 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 MYOTQ9UBF9 498 aa13.15□□□□□ -0.3
SNF8-203ENST00000504000 CRYM-AS1A6NIL9 109 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 DHRS7CA6NNS2 312 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SDCBPO00560 298 aaPredicted RBP13.14□□□□□ -0.31
SNF8-203ENST00000504000 IFNA21P01568 189 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 HOXB5P09067 269 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 PTGER4P35408 488 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 UCP2P55851 309 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SLC35A1P78382 337 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SPEM2Q0P670 501 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 COL19A1Q14993 1142 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 PEA15Q15121 130 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 IAH1Q2TAA2 248 aaPredicted RBP13.14□□□□□ -0.31
SNF8-203ENST00000504000 FAM76BQ5HYJ3 339 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 FNDC9Q8TBE3 224 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SLC22A8Q8TCC7 542 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 RXFP4Q8TDU9 374 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
SNF8-203ENST00000504000 WNT2BQ93097 391 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 PGAM5Q96HS1 289 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 LYZL4Q96KX0 146 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 S100A13Q99584 98 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 ESRP2Q9H6T0 727 aaKnown RBP13.14□□□□□ -0.31
SNF8-203ENST00000504000 GSKIPQ9P0R6 139 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 ATXN7L1Q9ULK2 861 aaPredicted RBP13.14□□□□□ -0.31
SNF8-203ENST00000504000 PCDHGA1Q9Y5H4 931 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 TIMM10BQ9Y5J6 103 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 KPTNQ9Y664 436 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 ADAMTS20P59510 1910 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 COLCA2A8K830 154 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 DKK1O94907 266 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 HTR3BO95264 441 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SPP1P10451 314 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 MSR1P21757 451 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
SNF8-203ENST00000504000 H3F3AP84243 136 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 ACY1Q03154 408 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 RNF212Q495C1 297 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SULF2Q8IWU5 870 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SEMA6DQ8NFY4 1073 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 C12orf57Q99622 126 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 PRRX2Q99811 253 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 SLC7A5P2Q9GIP4 190 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 NELFAQ9H3P2 528 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 IFT22Q9H7X7 185 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 TUBA4BQ9H853 241 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 METTL7AQ9H8H3 244 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 ZNF160Q9HCG1 818 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 HSF4Q9ULV5 492 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 STARD10Q9Y365 291 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 FAM96BQ9Y3D0 163 aa13.14□□□□□ -0.31
SNF8-203ENST00000504000 ZNF814B7Z6K7 855 aa13.13□□□□□ -0.31
SNF8-203ENST00000504000 STMND1H3BQB6 276 aa13.13□□□□□ -0.31
SNF8-203ENST00000504000 F12P00748 615 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms