RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DCUN1D4Q92564 292 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 HAS2Q92819 552 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PHYHIPLQ96FC7 376 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 ARPC5LQ9BPX5 153 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 NAA11Q9BSU3 229 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 NMES1Q9C002 83 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 GHRLQ9UBU3 117 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 OSGIN2Q9Y236 505 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 FLVCR1Q9Y5Y0 555 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 NSG1A0A0A6YYJ2 146 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 H0YIZ8 118 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 TDGF1P13385 188 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 CNR1P21554 472 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 NTF4P34130 210 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 SUCLG1P53597 346 aaKnown RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 RAC1P63000 192 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 HGFACQ04756 655 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 ZFP36L1Q07352 338 aaKnown RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 ANKRD55Q3KP44 614 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 Q6ZSR3 168 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 SLC16A14Q7RTX9 510 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 FAM219AQ8IW50 185 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 C20orf196Q8IYI0 205 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 ZSCAN4Q8NAM6 433 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 CSNK2A3Q8NEV1 391 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 SLC39A7Q92504 469 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 RRNAD1Q96FB5 475 aaKnown RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 RNF126Q9BV68 326 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 ELL3Q9HB65 397 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 PCDHGA1Q9Y5H4 931 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 IGKV1D-8A0A087WSZ0 117 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 TRBV6-7A0A0A0MS04 114 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 TSPAN4O14817 238 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 RPS2P15880 293 aaKnown RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 ACKR3P25106 362 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 HOXA6P31267 233 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 OR3A2P47893 321 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 PRSS12P56730 875 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 B3GALT5-AS1P59052 145 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 MC2RQ01718 297 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 PAN3Q58A45 887 aaKnown RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 ATRAIDQ6UW56 229 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 TFAP2EQ6VUC0 442 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 WDR5BQ86VZ2 330 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 OR5AP2Q8NGF4 316 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 OR2AE1Q8NHA4 323 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 SGK3Q96BR1 496 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 PIK3IP1Q96FE7 263 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 PIGQQ9BRB3 760 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 GPR173Q9NS66 373 aa8.62□□□□□ -1.03
CLIP1-204ENST00000501271 MCTS1Q9ULC4 181 aaKnown RBP8.62□□□□□ -1.03
CLIP1-204ENST00000501271 COL27A1Q8IZC6 1860 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 A0A1B0GW55 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 MSTNO14793 375 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 YKT6O15498 198 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 CBR3O75828 277 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 GP1BAP07359 652 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4L2P0CJ85 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4L3P0CJ86 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4L4P0CJ87 422 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4L5P0CJ88 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4L6P0CJ89 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4L7P0CJ90 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 CRYGSP22914 178 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 GLRA1P23415 457 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 FOLR3P41439 243 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF84P51523 738 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 TAS2R46P59540 309 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 RPS18P62269 152 aaKnown RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 MRPS34P82930 218 aaKnown RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 FAM27BQ5VT28 67 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 Q7L0L9 218 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 C6orf201Q7Z4U5 140 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 YRDCQ86U90 279 aaKnown RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 BOLLQ8N9W6 283 aaKnown RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 CDC6Q99741 560 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DNTTIP1Q9H147 329 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 RAB18Q9NP72 206 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF701Q9NV72 531 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 TAS2R3Q9NYW6 316 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 DUX4Q9UBX2 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 TEX13DA0A0J9YY54 714 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 MSGN1A6NI15 193 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 SERPINE3A8MV23 424 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 BET1O15155 118 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 MTRF1O75570 445 aaKnown RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 APOC3P02656 99 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 CPT2P23786 658 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 GABRR1P24046 479 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 TRA2AQ13595 282 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 TMEM17Q86X19 198 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 STOML3Q8TAV4 291 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 SPTSSAQ969W0 71 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 OR10C1Q96KK4 312 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 ALKBH3Q96Q83 286 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-204ENST00000501271 S100A13Q99584 98 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 HDHD3Q9BSH5 251 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms