RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TMEM185AQ8NFB2 350 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 OR4F17Q8NGA8 305 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 OR52H1Q8NGJ2 320 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 OR6K6Q8NGW6 343 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 NMNAT2Q9BZQ4 307 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF222Q9UK12 451 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 MPC1Q9Y5U8 109 aa11.9□□□□□ -0.5
TRAF4-212ENST00000498540 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 K7EIL1 84 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 PSG2P11465 335 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 IGLL1P15814 213 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 GLRA1P23415 457 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 PLA1AQ53H76 456 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 RPL13AP3Q6NVV1 102 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 CCBE1Q6UXH8 406 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-212ENST00000498540 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 OR9Q2Q8NGE9 314 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 RNF133Q8WVZ7 376 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 PYURFQ96I23 114 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 RNF170Q96K19 258 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 AMELYQ99218 206 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 BTBD10Q9BSF8 475 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 ABHD6Q9BV23 337 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 OR10A2Q9H208 303 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 SP140LQ9H930 580 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 TENM3Q9P273 2699 aa11.89□□□□□ -0.51
TRAF4-212ENST00000498540 COX7A1P24310 79 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 RAB13P51153 203 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 SLC25A1P53007 311 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 ERVFRD-1P60508 538 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 HDXQ7Z353 690 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 CPLX4Q7Z7G2 160 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 LHFPL4Q7Z7J7 247 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 FTMTQ8N4E7 242 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 C11orf42Q8N5U0 333 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 OR6N2Q8NGY6 317 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 OR4Q3Q8NH05 313 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 PIGCQ92535 297 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 PGAM5Q96HS1 289 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 OR5M11Q96RB7 305 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 CDCA4Q9BXL8 241 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 GORASP2Q9H8Y8 452 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 TBC1D23Q9NUY8 699 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 IL20Q9NYY1 176 aa11.88□□□□□ -0.51
TRAF4-212ENST00000498540 GMNNO75496 209 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 CST4P01036 141 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 APOC1P02654 83 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 FABP3P05413 133 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 CD33P20138 364 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 OPRL1P41146 370 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 GPM6AP51674 278 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 CAPZA1P52907 286 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 SNCBQ16143 134 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 ERI1Q8IV48 349 aaKnown RBP11.87□□□□□ -0.51
TRAF4-212ENST00000498540 LINC00471Q8N535 108 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 DTX3Q8N9I9 347 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 OR5K1Q8NHB7 308 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 SDSLQ96GA7 329 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 LYZL4Q96KX0 146 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 WNT10AQ9GZT5 417 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 RGCCQ9H4X1 137 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 HEXA-AS1Q9H8Q6 139 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 VIPAS39Q9H9C1 493 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 ABCB9Q9NP78 766 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 SPAG4Q9NPE6 437 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 TCF19Q9Y242 345 aa11.87□□□□□ -0.51
TRAF4-212ENST00000498540 A0A1W2PRX2 142 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 CCL3L1P16619 93 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 LGALS4P56470 323 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 CNN3Q15417 329 aaKnown RBP11.86□□□□□ -0.51
TRAF4-212ENST00000498540 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 DMRTC1Q5HYR2 192 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 Q6ZS46 218 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 RASSF6Q6ZTQ3 369 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 TIGD4Q8IY51 512 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 ZDHHC23Q8IYP9 409 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 INTS14Q96SY0 518 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 TSSK6Q9BXA6 273 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 MED20Q9H944 212 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 LYVE1Q9Y5Y7 322 aa11.86□□□□□ -0.51
TRAF4-212ENST00000498540 A6NDX4 124 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 FAM90A8PA6NJQ4 464 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 SOX14O95416 240 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 GASTP01350 101 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 H2BFMP0C1H6 154 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 BLVRAP53004 296 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
TRAF4-212ENST00000498540 ZNF273Q14593 569 aa11.85□□□□□ -0.51
TRAF4-212ENST00000498540 ZNF770Q6IQ21 691 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-212ENST00000498540 ZNF782Q6ZMW2 699 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms