RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	LRP12	Q9Y561	859 aa		13.4	□□□□□ -0.26
SUPT20H-223	ENST00000497318	MPC1	Q9Y5U8	109 aa		13.4	□□□□□ -0.26
SUPT20H-223	ENST00000497318	TVP23A	A6NH52	213 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZNF878	C9JN71	531 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CCDC22	O60826	627 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PAX6	P26367	422 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RPS27	P42677	84 aa	Known RBP	13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	GSK3A	P49840	483 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CAPZA1	P52907	286 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	MXRA7	P84157	204 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CD83	Q01151	205 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	HACD2	Q6Y1H2	254 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	KCTD8	Q6ZWB6	473 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	OR5AU1	Q8NGC0	362 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RHBDD3	Q9Y3P4	386 aa		13.39	□□□□□ -0.27
SUPT20H-223	ENST00000497318	AKR7A2	O43488	359 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SPARC	P09486	303 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	NHLRC4	P0CG21	123 aa	Predicted RBP	13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ANOS1	P23352	680 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	HSD11B1	P28845	292 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PYCR1	P32322	319 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	IFNGR2	P38484	337 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CX3CR1	P49238	355 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	KRTAP10-11	P60412	298 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SLC35F1	Q5T1Q4	408 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZNRF1	Q8ND25	227 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RPL3L	Q92901	407 aa	Known RBP	13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	HIST1H2AA	Q96QV6	131 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	OR10A2	Q9H208	303 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RGCC	Q9H4X1	137 aa		13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	DCAF13	Q9NV06	445 aa	Known RBP	13.38	□□□□□ -0.27
SUPT20H-223	ENST00000497318	hCG_38984	A0A1B0GV85	526 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TCRBV4S1A1T	A0A5B7	111 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318		A6NDX4	124 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	GLRA1	P23415	457 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	COX7A1	P24310	79 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	FMO3	P31513	532 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ENTPD1	P49961	510 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ERVFRD-1	P60508	538 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RPL31	P62899	125 aa	Known RBP	13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TMEM219	Q86XT9	240 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	OR5P3	Q8WZ94	311 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	MALSU1	Q96EH3	234 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RNF170	Q96K19	258 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ELL3	Q9HB65	397 aa	Predicted RBP	13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	USE1	Q9NZ43	259 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZMAT5	Q9UDW3	170 aa	Known RBP	13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CD300A	Q9UGN4	299 aa		13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.37	□□□□□ -0.27
SUPT20H-223	ENST00000497318	FAM90A8P	A6NJQ4	464 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZNF593	O00488	134 aa	Predicted RBP	13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	NDUFAB1	O14561	156 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RHBDL1	O75783	438 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TFF1	P04155	84 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SEMG1	P04279	462 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RAB13	P51153	203 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SLC25A1	P53007	311 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	EGFEM1P	Q0D2K5	195 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PRDX4	Q13162	271 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	GFOD2	Q3B7J2	385 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	KLHL22	Q53GT1	634 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PLA1A	Q53H76	456 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	FAM76B	Q5HYJ3	339 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TEX30	Q5JUR7	227 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	FAM57B	Q71RH2	274 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PIGW	Q7Z7B1	504 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TIGD4	Q8IY51	512 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZNF671	Q8TAW3	534 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	DHRS1	Q96LJ7	313 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	FAM107B	Q9H098	131 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	C19orf12	Q9NSK7	152 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TBL2	Q9Y4P3	447 aa	Known RBP	13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	COMMD3-BMI1	R4GMX3	469 aa		13.36	□□□□□ -0.27
SUPT20H-223	ENST00000497318	IGKV1D-17	A0A075B6S4	117 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	ZNF850	A8MQ14	1090 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SYNGR1	O43759	233 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CST4	P01036	141 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PSG2	P11465	335 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	TMEM200B	Q69YZ2	307 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	OR52L1	Q8NGH7	329 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	OR51L1	Q8NGJ5	315 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SDSL	Q96GA7	329 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	MUC13	Q9H3R2	512 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	PPP1R3E	Q9H7J1	279 aa		13.35	□□□□□ -0.27
SUPT20H-223	ENST00000497318	DHRS12	A0PJE2	317 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	C3orf84	H3BNL1	204 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SLC1A7	O00341	560 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	BLVRA	P53004	296 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	OR12D2	P58182	307 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	BLCAP	P62952	87 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	COL10A1	Q03692	680 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	SSX2	Q16385	188 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	HSP90B2P	Q58FF3	399 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	RPL13AP3	Q6NVV1	102 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	CCDC121	Q6ZUS5	278 aa		13.34	□□□□□ -0.27
SUPT20H-223	ENST00000497318	LHFPL4	Q7Z7J7	247 aa		13.34	□□□□□ -0.27

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