RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 MEP1BQ16820 701 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 NKPD1Q17RQ9 610 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MESTQ5EB52 335 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 DCAF12Q5T6F0 453 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ARL9Q6T311 187 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 PLXDC2Q6UX71 529 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 DTX1Q86Y01 620 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ACBD7Q8N6N7 88 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MCFD2Q8NI22 146 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF431Q8TF32 576 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 SMPDL3BQ92485 455 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 FAM46BQ96A09 425 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 DAZAP1Q96EP5 407 aaKnown RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 EAF1Q96JC9 268 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 DDA1Q9BW61 102 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ANGPTL4Q9BY76 406 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 LAT2Q9GZY6 243 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 WDR76Q9H967 626 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 MED29Q9NX70 200 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 PADI1Q9ULC6 663 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TBC1D24Q9ULP9 559 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TMED7Q9Y3B3 224 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF337Q9Y3M9 751 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
SSBP1-213ENST00000496622 TNRC6BQ9UPQ9 1833 aaKnown RBP5.45□□□□□ -1.54
SSBP1-213ENST00000496622 A0A0G2JMM0 328 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1W2PPB8 328 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1W2PPE3 182 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1W2PRS3 328 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 A6NIN4 97 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 A8MWP6 167 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 KIR3DP1A8MWS1 328 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF814B7Z6K7 855 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 J3QRE1 110 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CDRT1O95170 752 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 IFNA21P01568 189 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 TFPIP10646 304 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SLC2A5P22732 501 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 UCP1P25874 307 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 HLA-DMAP28067 261 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PTGDSP41222 190 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RPS4XP62701 263 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF85Q03923 595 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SRSF6Q13247 344 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MAB21L1Q13394 359 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 OR7A5Q15622 319 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 HES3Q5TGS1 186 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF322Q6U7Q0 402 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 BTNL3Q6UXE8 466 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 DPY19L2P2Q6ZN68 376 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SLC35D2Q76EJ3 337 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PARP16Q8N5Y8 322 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF283Q8N7M2 679 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SUMF1Q8NBK3 374 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ST6GALNAC3Q8NDV1 305 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 OR2Y1Q8NGV0 311 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 GLMPQ8WWB7 406 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RAB3CQ96E17 227 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MRPS24Q96EL2 167 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SAT2Q96F10 170 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 IMMP1LQ96LU5 166 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 BBC3Q96PG8 261 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 TSPAN32Q96QS1 320 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 NKX3-1Q99801 234 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PDCD1LG2Q9BQ51 273 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PIMREGQ9BSJ6 248 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 TXNL4BQ9NX01 149 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SF3B6Q9Y3B4 125 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RALGAPA1Q6GYQ0 2036 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 NSG1A0A0A6YYJ2 146 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CLEC18AA5D8T8 446 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 C9J4A7 227 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 LPLP06858 475 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CALCBP10092 127 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PNMTP11086 282 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PGCP20142 388 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MYL9P24844 172 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CCKBRP32239 447 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 AKR1C3P42330 323 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SRP9P49458 86 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SORDQ00796 357 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 FMODQ06828 376 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF616Q08AN1 781 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MLLT11Q13015 90 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SNTB2Q13425 540 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 IL10RAQ13651 578 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ACKR1Q16570 336 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ATP6V1FQ16864 119 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SLC22A6Q4U2R8 563 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 C1orf140Q5VVS0 124 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 C19orf48Q6RUI8 117 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CLEC18BQ6UXF7 455 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 NR2C2APQ86WQ0 139 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SPACA3Q8IXA5 215 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM156Q8N614 296 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 LRRC75AQ8NAA5 344 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CLEC18CQ8NCF0 446 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 DEFB124Q8NES8 71 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms