RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 FJX1Q86VR8 437 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 NAXEQ8NCW5 288 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 DEDD2Q8WXF8 326 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 WBP1Q96G27 269 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 BOD1Q96IK1 185 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 FAM210AQ96ND0 272 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 CST11Q9H112 138 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 C20orf85Q9H1P6 137 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 GPR160Q9UJ42 338 aa11.8□□□□□ -0.52
SPTBN1-205ENST00000496323 ZNF850A8MQ14 1090 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 FOXI3A8MTJ6 420 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 SPRY1O43609 319 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 ANGPTL7O43827 346 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 TMEM225BP0DP42 221 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 MGMTP16455 207 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 SERPINA2P20848 420 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 EIF2B2P49770 351 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 ACTBP60709 375 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 UBE2NP61088 152 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 ACTG1P63261 375 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 MALLQ13021 153 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 LINC00303Q3SY05 128 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 KRTCAP3Q53RY4 240 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 LHFPL2Q6ZUX7 228 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 MRPL21Q7Z2W9 205 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 CCDC36Q8IYA8 594 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 WDR31Q8NA23 367 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 NUDCD2Q8WVJ2 157 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 BORCS8Q96FH0 119 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 FGF23Q9GZV9 251 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 ZNF71Q9NQZ8 489 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 NKIRAS2Q9NYR9 191 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 KCNN3Q9UGI6 736 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 MED12LQ86YW9 2145 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 C7orf66A4D0T2 115 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 RRP8O43159 456 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 SSX5O60225 188 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 PLATP00750 562 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 FUT6P51993 359 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 PER3P56645 1201 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 FAM180AQ6UWF9 173 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 ASCL4Q6XD76 172 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 CD163Q86VB7 1156 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 OR56B4Q8NH76 319 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 GHITMQ9H3K2 345 aa11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 ZNF629Q9UEG4 869 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-205ENST00000496323 IGKV1-12A0A0C4DH73 117 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 DLL1O00548 723 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 WDR1O75083 606 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 DHFRP00374 187 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 IGKV1D-12P01611 117 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 HIST1H1DP16402 221 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 IDH3GP51553 393 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 RAG2P55895 527 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 ATAD3CQ5T2N8 411 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 STEAP1BQ6NZ63 245 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 C3P1Q6ZMU1 363 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 TRAPPC6BQ86SZ2 158 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 OR56B1Q8NGI3 324 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 OR51T1Q8NGJ9 327 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 URM1Q9BTM9 101 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 OR10A4Q9H209 315 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 ELL3Q9HB65 397 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 LILRA1O75019 489 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 TAS2R19P59542 299 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 SF3B4Q15427 424 aaKnown RBP eCLIP11.78□□□□□ -0.524e-21■■■■□ 26.2
SPTBN1-205ENST00000496323 C1orf185Q5T7R7 199 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 CXorf67Q86X51 503 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 GVQW1Q8N7I0 195 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 C1orf162Q8NEQ5 155 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 OR4S1Q8NGB4 309 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 FAM57AQ8TBR7 257 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 HPSE2Q8WWQ2 592 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 TECTBQ96PL2 329 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 S100A13Q99584 98 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 PAPOLGQ9BWT3 736 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 POU2F3Q9UKI9 436 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 SLC7A11Q9UPY5 501 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 RAXQ9Y2V3 346 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 ARHGAP21Q5T5U3 1957 aa11.78□□□□□ -0.52
SPTBN1-205ENST00000496323 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 MFNGO00587 321 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 NDUFB6O95139 128 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 CST4P01036 141 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 PTGER4P35408 488 aa11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 FAUP35544 74 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-205ENST00000496323 TDGF1P3P51864 188 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms