RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 OR10AC1Q8NH08 325 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 HPSE2Q8WWQ2 592 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 UFD1Q92890 307 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 GPR173Q9NS66 373 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 UFSP2Q9NUQ7 469 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 CACNG2Q9Y698 323 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 OTOGQ6ZRI0 2925 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 PNMA8CA0A1B0GUJ8 204 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 TRIM64A6NGJ6 449 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 TRIM64BA6NI03 449 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF732B4DXR9 585 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 LMX1BO60663 402 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 TNFAIP8O95379 198 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 MAP2K4P45985 399 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 GPM6AP51674 278 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 MLLT11Q13015 90 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-235ENST00000495515 FAM76BQ5HYJ3 339 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF773Q6PK81 442 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 SERPINA12Q8IW75 414 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 MS4A15Q8N5U1 240 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 FCGR1BQ92637 280 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 ADAT3Q96EY9 351 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-235ENST00000495515 PGLYRP3Q96LB9 341 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 REG4Q9BYZ8 158 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 BPESC1Q9GZL8 116 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 PPP1R3EQ9H7J1 279 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 ACOT13Q9NPJ3 140 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 C1orf123Q9NWV4 160 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 RNF7Q9UBF6 113 aa14.44□□□□□ -0.1
HDAC6-235ENST00000495515 MED13LQ71F56 2210 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 hCG_1807616A0A1W2PRN6 198 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 LRP5LA4QPB2 252 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 VWC2LB2RUY7 222 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 TMEM178BH3BS89 294 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 PRKACBP22694 351 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 THBS2P35442 1172 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 SOX2P48431 317 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 FUT6P51993 359 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 EMX1Q04741 257 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF154Q13106 437 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 MPPED2Q15777 294 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 Q499Y3 187 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF573Q86YE8 665 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 SPARTQ8N0X7 666 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 PARP16Q8N5Y8 322 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF420Q8TAQ5 688 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-235ENST00000495515 SPSB1Q96BD6 273 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 MGLLQ99685 303 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 TLNRD1Q9H1K6 362 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 ZCCHC4Q9H5U6 513 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 NPTNQ9Y639 398 aa14.43□□□□□ -0.1
HDAC6-235ENST00000495515 TEP1Q99973 2627 aaKnown RBP14.42□□□□□ -0.1
HDAC6-235ENST00000495515 RNF223E7ERA6 249 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 ATF1P18846 271 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 USF1P22415 310 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-235ENST00000495515 MAPK3P27361 379 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-235ENST00000495515 TPBGQ13641 420 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 UBE2V2Q15819 145 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 WDR86Q86TI4 376 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 DNAAF1Q8NEP3 725 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 RGP1Q92546 391 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-235ENST00000495515 TMEM106AQ96A25 262 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 BORCS8Q96FH0 119 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 CKLFQ9UBR5 152 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 WIPI2Q9Y4P8 454 aa14.42□□□□□ -0.1
HDAC6-235ENST00000495515 TRBV5-5A0A0J9YX44 114 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 FAM230AA0A1W2PPH8 454 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 PQLC2LA1A4F0 135 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 H7C1Q1 480 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 CDIPTO14735 213 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 ALX3O95076 343 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 CYB5R3P00387 301 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-235ENST00000495515 HEXAP06865 529 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 PMELP40967 661 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 ATP1B3P54709 279 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 LOXL1Q08397 574 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-235ENST00000495515 TRAM1Q15629 374 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 LIPKQ5VXJ0 399 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 MUC20Q8N307 709 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-235ENST00000495515 SCCPDHQ8NBX0 429 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 OR13C9Q8NGT0 318 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF671Q8TAW3 534 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 TRMT10AQ8TBZ6 339 aaKnown RBP14.41□□□□□ -0.1
HDAC6-235ENST00000495515 CPNE2Q96FN4 548 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-235ENST00000495515 OR51I2Q9H344 312 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 POLDIP2Q9Y2S7 368 aa14.41□□□□□ -0.1
HDAC6-235ENST00000495515 PPIAL4EA0A075B759 164 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 ISPDA4D126 451 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 PPIAL4DF5H284 164 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 MAGEB3O15480 346 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 SULT1B1O43704 296 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 FSTL3O95633 263 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 PPIAL4FP0DN26 164 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 CD99P14209 185 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 CPEP16870 476 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 RAB3AP20336 220 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 AZGP1P25311 298 aaKnown RBP14.4□□□□□ -0.1
HDAC6-235ENST00000495515 PSMA1P25786 263 aaKnown RBP14.4□□□□□ -0.1
HDAC6-235ENST00000495515 CFHR2P36980 270 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 MDH2P40926 338 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms