RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 KRT33AO76009 404 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 RPP14O95059 124 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 PSMB6P28072 239 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HSD11B1P28845 292 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HOXA1P49639 335 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 LGALS4P56470 323 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HNRNPA0Q13151 305 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 OR2A2Q6IF42 318 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 LRRN1Q6UXK5 716 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF627Q7L945 461 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 LRRC18Q8N456 261 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 RFLNBQ8N5W9 214 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 TRMT61AQ96FX7 289 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 TRAF4Q9BUZ4 470 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 RBM24Q9BX46 236 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 C6orf62Q9GZU0 229 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HDHD2Q9H0R4 259 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 PLSCR3Q9NRY6 295 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 FRRS1LQ9P0K9 344 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ERRFI1Q9UJM3 462 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF391Q9UJN7 358 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF221Q9UK13 617 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HHLA2Q9UM44 414 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 FOXJ3Q9UPW0 622 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 NCKAP5O14513 1909 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 IGKV1D-43A0A0B4J1Z2 117 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 TMEM269A0A1B0GVZ9 245 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 ISPDA4D126 451 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 CENPXA8MT69 81 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 K7ENP7 123 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SRSF10O75494 262 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 EGR1P18146 543 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 APEX1P27695 318 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SELENOPP49908 381 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 TMPRSS3P57727 454 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 RPS11P62280 158 aaKnown RBP eCLIP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SRSF6Q13247 344 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 KHDC1LQ5JSQ8 128 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 BCL2L15Q5TBC7 163 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 TMEM65Q6PI78 240 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 INO80CQ6PI98 192 aaPredicted RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 OCC1Q8TAD7 63 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SPTSSAQ969W0 71 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 GMPPAQ96IJ6 420 aaPredicted RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 LURAP1Q96LR2 239 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 DERL3Q96Q80 235 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 CCDC32Q9BV29 185 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 DEFB127Q9H1M4 99 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 RGCCQ9H4X1 137 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 RANBP3Q9H6Z4 567 aaPredicted RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 UFSP2Q9NUQ7 469 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 TMEM38BQ9NVV0 291 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 CKLFQ9UBR5 152 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 MLXQ9UH92 298 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 NUFIP1Q9UHK0 495 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 OR52A1Q9UKL2 312 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 PRELID3BQ9Y3B1 194 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 GRIP1Q9Y3R0 1128 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 TBL2Q9Y4P3 447 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 LHFPL6Q9Y693 200 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM90A18PA6NE21 464 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM90A16PA6NEW6 464 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SLC22A20A6NK97 555 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM90A9PA6NNJ1 464 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM90A5PA8MXJ8 464 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF587BE7ETH6 402 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 GMDSO60547 372 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 ANXA2P07355 339 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM90A15PP0C7V4 464 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM90A14PP0C7W9 464 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 PSKH1P11801 424 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 GABRA1P14867 456 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FSTP19883 344 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 CFPP27918 469 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 GPX4P36969 197 aaPredicted RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SRYQ05066 204 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 RAB35Q15286 201 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SOWAHCQ53LP3 525 aaPredicted RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 Q5BKY6 102 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 BAIAP2L2Q6UXY1 529 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 ASCL4Q6XD76 172 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 RPTNQ6XPR3 784 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 P4HA3Q7Z4N8 544 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 CCDC190Q86UF4 302 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SNX29P2Q8IUI4 249 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SPACA3Q8IXA5 215 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 NUDT10Q8NFP7 164 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SMAP2Q8WU79 429 aaPredicted RBP5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 YIPF5Q969M3 257 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 APH1AQ96BI3 265 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 C10orf35Q96D05 121 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 FOXB1Q99853 325 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SLC30A2Q9BRI3 323 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 SLC22A4Q9H015 551 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 RNF167Q9H6Y7 350 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 GPR35Q9HC97 309 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 UPB1Q9UBR1 384 aa5.86□□□□□ -1.47
FNDC3B-212ENST00000494000 PLEKHB1Q9UF11 243 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms