RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 HTR1AP08908 422 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 ZFP36P26651 326 aaKnown RBP9.75□□□□□ -0.85
UBA3-211ENST00000493957 MDH2P40926 338 aaKnown RBP9.75□□□□□ -0.85
UBA3-211ENST00000493957 GPM6AP51674 278 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 GTF2A1P52655 376 aaPredicted RBP9.75□□□□□ -0.85
UBA3-211ENST00000493957 GMFBP60983 142 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 ACTA2P62736 377 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 ACTG2P63267 376 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 LCN2P80188 198 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 ZNF404Q494X3 552 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 TMEM155Q4W5P6 130 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 KLHL22Q53GT1 634 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 PLCXD3Q63HM9 321 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 TMEM42Q69YG0 159 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 FDX2Q6P4F2 183 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 WDR82Q6UXN9 313 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 IZUMO2Q6UXV1 221 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 DOK3Q7L591 496 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 THAP5Q7Z6K1 395 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 SPERTQ8NA61 448 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 SCCPDHQ8NBX0 429 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 OR51A4Q8NGJ6 313 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 LRRC29Q8WV35 223 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 SGCDQ92629 289 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 RTL8AQ9BWD3 113 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 TLNRD1Q9H1K6 362 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 PATZ1Q9HBE1 687 aaKnown RBP9.75□□□□□ -0.85
UBA3-211ENST00000493957 INPP5EQ9NRR6 644 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 RNF7Q9UBF6 113 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 ENPP5Q9UJA9 477 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 MXRA5Q9NR99 2828 aa9.75□□□□□ -0.85
UBA3-211ENST00000493957 PPIAL4EA0A075B759 164 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 LRRC30A6NM36 301 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 KIAA1324LA8MWY0 1029 aaPredicted RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 B4DSR2 109 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 ZNF732B4DXR9 585 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 PPIAL4DF5H284 164 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 CDIPTO14735 213 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 SYT7O43581 403 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 FCN3O75636 299 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 RHBDL1O75783 438 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 LALBAP00709 142 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 NRASP01111 189 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 LHBP01229 141 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 TFF1P04155 84 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 MSMBP08118 114 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 PPIAL4FP0DN26 164 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 IRF2P14316 349 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 ATP6V1B1P15313 513 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 ALKBH1Q13686 389 aaKnown RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 AHSA2Q719I0 299 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 KCTD20Q7Z5Y7 419 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 C1orf87Q8N0U7 546 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 SYS1Q8N2H4 156 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 FTMTQ8N4E7 242 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 BPIFB6Q8NFQ5 453 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 NPRL2Q8WTW4 380 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 ERGIC1Q969X5 290 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 RAB39BQ96DA2 213 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 ADAT3Q96EY9 351 aaPredicted RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 POM121Q96HA1 1249 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 OR51I2Q9H344 312 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 CTSZQ9UBR2 303 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 KCNS2Q9ULS6 477 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 PCDHB10Q9UN67 800 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 DIMT1Q9UNQ2 313 aaKnown RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 PPIAL4AQ9Y536 164 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 PCDHGB5Q9Y5G0 923 aa9.74□□□□□ -0.85
UBA3-211ENST00000493957 SIRT4Q9Y6E7 314 aaPredicted RBP9.74□□□□□ -0.85
UBA3-211ENST00000493957 KRTAP9-6A0A140TA67 174 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 A0A1B0GW55 424 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 H0YJX3 145 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 LGALS8O00214 317 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 PHF1O43189 567 aaPredicted RBP9.73□□□□□ -0.85
UBA3-211ENST00000493957 CRLF1O75462 422 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 GYPAP02724 150 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 UBCP0CG48 685 aaKnown RBP9.73□□□□□ -0.85
UBA3-211ENST00000493957 DUX4L2P0CJ85 424 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 DUX4L3P0CJ86 424 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 DUX4L4P0CJ87 422 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 DUX4L5P0CJ88 424 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 DUX4L6P0CJ89 424 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 DUX4L7P0CJ90 424 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
UBA3-211ENST00000493957 DCKP27707 260 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 DVL1P1P54792 670 aaPredicted RBP9.73□□□□□ -0.85
UBA3-211ENST00000493957 MZT1Q08AG7 82 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 ST3GAL4Q11206 333 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 RIPK1Q13546 671 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 UBE2V2Q15819 145 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 SNCBQ16143 134 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 CR1LQ2VPA4 569 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 CEACAM21Q3KPI0 293 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 FAM76BQ5HYJ3 339 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 CLVS2Q5SYC1 327 aa9.73□□□□□ -0.85
UBA3-211ENST00000493957 FAM120AOSQ5T036 256 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms