RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 POLR2J3Q9H1A7 115 aaKnown RBP7.14□□□□□ -1.27
HDAC6-234ENST00000493923 NOX3Q9HBY0 568 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 CTPS2Q9NRF8 586 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 INPP5EQ9NRR6 644 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 RLIMQ9NVW2 624 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 PARPBPQ9NWS1 579 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 KLHL9Q9P2J3 617 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 KLHL13Q9P2N7 655 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 KPTNQ9Y664 436 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
HDAC6-234ENST00000493923 ELOA3CA0A087WX78 387 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 A0A1W2PRQ8 180 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 TMEM72A0PK05 275 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 KIAA1324LA8MWY0 1029 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 HMGN4O00479 90 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RNASET2O00584 256 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 HS3ST1O14792 307 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 ARPC1BO15143 372 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 FGF16O43320 207 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 LYZL6O75951 148 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 NDUFB6O95139 128 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 SPDEFO95238 335 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 IGHV3-9P01782 118 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 CHRM4P08173 479 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 HIST1H1BP16401 226 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 DDTP30046 118 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 GDNFP39905 211 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RBM34P42696 430 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 MTNR1AP48039 350 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 CCR6P51684 374 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 SUMO3P55854 103 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RAB1AP62820 205 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 NAAAQ02083 359 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 NHLH2Q02577 135 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 SCARB2Q14108 478 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RGNQ15493 299 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 SYPL1Q16563 259 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 SYT14P1Q58G82 188 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RNASE10Q5GAN6 216 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 C9orf152Q5JTZ5 239 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 UBE2NLQ5JXB2 153 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 COX20Q5RI15 118 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 THEM4Q5T1C6 240 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF613Q6PF04 617 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 C20orf204Q6ZNR8 217 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 HIST2H3AQ71DI3 136 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 OR2W3Q7Z3T1 314 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 ZFP82Q8N141 532 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 BEND2Q8NDZ0 799 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 DNAAF1Q8NEP3 725 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 OR10H5Q8NGA6 315 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 ST7LQ8TDW4 575 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RNF141Q8WVD5 230 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 PHYHIPQ92561 330 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 PIGTQ969N2 578 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 R3HDM4Q96D70 268 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 MRGPRX4Q96LA9 322 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 OR5B2Q96R09 309 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 VRK1Q99986 396 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 RSPO3Q9BXY4 272 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 HRASLSQ9HDD0 168 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 ZNF701Q9NV72 531 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 TAS2R8Q9NYW2 309 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 COMMD9Q9P000 198 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 UPB1Q9UBR1 384 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 LAMP5Q9UJQ1 280 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 GPR52Q9Y2T5 361 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 ARFGEF3Q5TH69 2177 aa7.13□□□□□ -1.27
HDAC6-234ENST00000493923 YLPM1P49750 1951 aaKnown RBP7.13□□□□□ -1.27
HDAC6-234ENST00000493923 TRAV1-2A0A0B4J238 106 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 A0A1W2PR80 420 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ZC3H12DA2A288 527 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 GGT3PA6NGU5 568 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 SEC14L6B5MCN3 397 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 RNF13O43567 381 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CYTIPO60759 359 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CNOT4O95628 575 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CSTAP01040 98 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 AVPP01185 164 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 GASTP01350 101 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CD8AP01732 235 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 MT-ND4P03905 459 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 H1F0P07305 194 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 LINC00614P0C842 121 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 DANCRP0C864 163 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 HKR1P10072 659 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 COX5BP10606 129 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 TPT1P13693 172 aaKnown RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 IGHV1-2P23083 117 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 ADH6P28332 368 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 NOS3P29474 1203 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 THBS2P35442 1172 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CDKN1AP38936 164 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 OR3A2P47893 321 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CDX1P47902 265 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-234ENST00000493923 DIO1P49895 249 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 CAV3P56539 151 aa7.12□□□□□ -1.27
HDAC6-234ENST00000493923 BPIFB3P59826 476 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms