RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TMEM185AQ8NFB2 350 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 OR4Q3Q8NH05 313 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 RNF133Q8WVZ7 376 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 AMELYQ99218 206 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 IL1RAPQ9NPH3 570 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 NECAP2Q9NVZ3 263 aa13.78□□□□□ -0.2
TOP3B-217ENST00000489581 IGKV1D-17A0A075B6S4 117 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 FBXO24O75426 580 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 RHBDL1O75783 438 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 GASTP01350 101 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 CD28P10747 220 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 BMXP51813 675 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 HABP2Q14520 560 aaPredicted RBP13.77□□□□□ -0.21
TOP3B-217ENST00000489581 SNCBQ16143 134 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 FAM76BQ5HYJ3 339 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 ZBTB37Q5TC79 503 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 LINC01590Q5TEZ4 76 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 RASSF6Q6ZTQ3 369 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 OR4S1Q8NGB4 309 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 HPSE2Q8WWQ2 592 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 R3HDM4Q96D70 268 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 NSMCE2Q96MF7 247 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 MED20Q9H944 212 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 ARGLU1Q9NWB6 273 aaPredicted RBP13.77□□□□□ -0.21
TOP3B-217ENST00000489581 MAGEL2Q9UJ55 1249 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 LYVE1Q9Y5Y7 322 aa13.77□□□□□ -0.21
TOP3B-217ENST00000489581 SOX14O95416 240 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 CST4P01036 141 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 H2BFMP0C1H6 154 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 PSG2P11465 335 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 DCTDP32321 178 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 OPRL1P41146 370 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 GPM6AP51674 278 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 CAPZA1P52907 286 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 HMGA2P52926 109 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 EMX1Q04741 257 aaPredicted RBP13.76□□□□□ -0.21
TOP3B-217ENST00000489581 AANATQ16613 207 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 LCE2DQ5TA82 110 aaPredicted RBP13.76□□□□□ -0.21
TOP3B-217ENST00000489581 LINC00471Q8N535 108 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 PHF21AQ96BD5 680 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 LYZL4Q96KX0 146 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 INTS14Q96SY0 518 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 RGCCQ9H4X1 137 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 ZNF702PQ9H963 129 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 ABCB9Q9NP78 766 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 C19orf12Q9NSK7 152 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 SERTAD4Q9NUC0 356 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 ARMC1Q9NVT9 282 aa13.76□□□□□ -0.21
TOP3B-217ENST00000489581 TRBV23-1A0A0A0MS06 115 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 TNFRSF11BO00300 401 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 ARPC2O15144 300 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 KRT36O76013 467 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 HSD17B1P14061 328 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 H2AFXP16104 143 aaPredicted RBP13.75□□□□□ -0.21
TOP3B-217ENST00000489581 BLVRAP53004 296 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 ERVFRD-1P60508 538 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 PPP1R8Q12972 351 aaKnown RBP13.75□□□□□ -0.21
TOP3B-217ENST00000489581 DMRTC1Q5HYR2 192 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 ZNF770Q6IQ21 691 aaPredicted RBP13.75□□□□□ -0.21
TOP3B-217ENST00000489581 ZDHHC23Q8IYP9 409 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 HIST1H2AAQ96QV6 131 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 CCDC134Q9H6E4 229 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 YY1AP1Q9H869 796 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 HEXA-AS1Q9H8Q6 139 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 ZNF222Q9UK12 451 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 BAIAP2Q9UQB8 552 aa13.75□□□□□ -0.21
TOP3B-217ENST00000489581 DNAH3Q8TD57 4116 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 FAM183AA6NL82 134 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 CCNB2O95067 398 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 IFNGP01579 166 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 COX7A1P24310 79 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 GSTT1P30711 240 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 RAB13P51153 203 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 LGALS4P56470 323 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 PLA1AQ53H76 456 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 SAMD4BQ5PRF9 694 aaKnown RBP13.74□□□□□ -0.21
TOP3B-217ENST00000489581 LIAT1Q6ZQX7 453 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 SHFQ7M4L6 423 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-217ENST00000489581 DTX3Q8N9I9 347 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 AQP11Q8NBQ7 271 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 PAPD5Q8NDF8 572 aaKnown RBP13.74□□□□□ -0.21
TOP3B-217ENST00000489581 OR2T33Q8NG76 320 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
TOP3B-217ENST00000489581 CITED2Q99967 270 aaPredicted RBP13.74□□□□□ -0.21
TOP3B-217ENST00000489581 RIIAD1A6NNX1 92 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 ZNF732B4DXR9 585 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 CEP78Q5JTW2 689 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 LHFPL4Q7Z7J7 247 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 NDUFA11Q86Y39 141 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 C11orf42Q8N5U0 333 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 OR4F17Q8NGA8 305 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 OR5K1Q8NHB7 308 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 THEM6Q8WUY1 208 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 OR4F4Q96R69 305 aa13.73□□□□□ -0.21
TOP3B-217ENST00000489581 OR5M11Q96RB7 305 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms