RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 HPSE2Q8WWQ2 592 aa14.51□□□□□ -0.09
MDC1-206ENST00000489540 OR8B2Q96RD0 313 aa14.51□□□□□ -0.09
MDC1-206ENST00000489540 ALG8Q9BVK2 526 aa14.51□□□□□ -0.09
MDC1-206ENST00000489540 MYRFQ9Y2G1 1151 aa14.51□□□□□ -0.09
MDC1-206ENST00000489540 TANC2Q9HCD6 1990 aa14.51□□□□□ -0.09
MDC1-206ENST00000489540 IRGMA1A4Y4 181 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 OR5B21A6NL26 309 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 A8MXK9 166 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 ZNF732B4DXR9 585 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 C3orf80F5H4A9 247 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 J3QLW9 94 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 UBCP0CG48 685 aaKnown RBP14.5□□□□□ -0.09
MDC1-206ENST00000489540 ZNF19P17023 458 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 SRP14P37108 136 aaKnown RBP14.5□□□□□ -0.09
MDC1-206ENST00000489540 CAPGP40121 348 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 PSMB10P40306 273 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 GPM6AP51674 278 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 CSNK2BP67870 215 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 ODF4Q2M2E3 257 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 CEP78Q5JTW2 689 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 TMEM244Q5VVB8 128 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 DCAF12L2Q5VW00 463 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 TEX36Q5VZQ5 186 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 PLCXD3Q63HM9 321 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 TMEM42Q69YG0 159 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 LHFPL3Q86UP9 236 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 PRIMA1Q86XR5 153 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 PRSS35Q8N3Z0 413 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 C19orf18Q8NEA5 215 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 OR52I1Q8NGK6 324 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 OR10Z1Q8NGY1 313 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 RNF166Q96A37 237 aaPredicted RBP14.5□□□□□ -0.09
MDC1-206ENST00000489540 C4orf36Q96KX1 117 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 SSBP3Q9BWW4 388 aaPredicted RBP14.5□□□□□ -0.09
MDC1-206ENST00000489540 METTL17Q9H7H0 456 aaPredicted RBP14.5□□□□□ -0.09
MDC1-206ENST00000489540 ERVK13-1Q9NX77 482 aa14.5□□□□□ -0.09
MDC1-206ENST00000489540 NKX1-2Q9UD57 310 aaPredicted RBP14.5□□□□□ -0.09
MDC1-206ENST00000489540 HTR1AP08908 422 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 MUC1P15941 1255 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 CD80P33681 288 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 CCR9P51686 369 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 SEC61A1P61619 476 aaKnown RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 GNB2P62879 340 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 MRPL28Q13084 256 aaKnown RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 SMN1Q16637 294 aaKnown RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 MICBQ29980 383 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 IL17RELQ6ZVW7 336 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 SCCPDHQ8NBX0 429 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 CNIH3Q8TBE1 160 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 HAVCR2Q8TDQ0 301 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 RPL3LQ92901 407 aaKnown RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 C10orf35Q96D05 121 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 PELI1Q96FA3 418 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 JAM3Q9BX67 310 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 FGF23Q9GZV9 251 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 OR51I2Q9H344 312 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 FGF20Q9NP95 211 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 FRRS1LQ9P0K9 344 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 OR5V1Q9UGF6 321 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 JMJD1CQ15652 2540 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 SRRM5B3KS81 715 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 TNFRSF13BO14836 293 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 PHF1O43189 567 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 RPSAP08865 295 aaKnown RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 DCKP27707 260 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 KIR3DL2P43630 455 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 PITPNBP48739 271 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 HOXA4Q00056 320 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 LYPD2Q6UXB3 125 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 C8orf59Q8N0T1 100 aaPredicted RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 ZNF671Q8TAW3 534 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 C12orf43Q96C57 262 aaKnown RBP14.49□□□□□ -0.09
MDC1-206ENST00000489540 ZNF649Q9BS31 505 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 PLEKHA1Q9HB21 404 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 ERVK-18Q9QC07 812 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 CLN8Q9UBY8 286 aa14.49□□□□□ -0.09
MDC1-206ENST00000489540 KIAA1324LA8MWY0 1029 aaPredicted RBP14.48□□□□□ -0.09
MDC1-206ENST00000489540 SERPINA3P01011 423 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 ISG15P05161 165 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 EGR1P18146 543 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 NPY4RP50391 375 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 FAM90A1Q86YD7 464 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 ZNF573Q86YE8 665 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 RDH10Q8IZV5 341 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 TMPRSS13Q9BYE2 586 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 C7orf69Q9H7B7 122 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 MMP26Q9NRE1 261 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 GPR173Q9NS66 373 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 ABCA2Q9BZC7 2435 aa14.48□□□□□ -0.09
MDC1-206ENST00000489540 LOC107986453A0A1B0GWG9 222 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 ANKRD61A6NGH8 418 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 A6NIN4 97 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 H0YJX3 145 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 TRAPPC2LH3BP13 241 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 ADAM20O43506 726 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 GYPAP02724 150 aa14.47□□□□□ -0.09
MDC1-206ENST00000489540 GBX2P52951 348 aaPredicted RBP14.47□□□□□ -0.09
MDC1-206ENST00000489540 NANOS3P60323 173 aaKnown RBP14.47□□□□□ -0.09
MDC1-206ENST00000489540 ALKBH1Q13686 389 aaKnown RBP14.47□□□□□ -0.09
MDC1-206ENST00000489540 WDR25Q64LD2 544 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms