RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 BCKDKO14874 412 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 ZNF73O43830 326 aaPredicted RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 KCNK2O95069 426 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 FARS2O95363 451 aaKnown RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 AGTP01019 485 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 THRAP10827 490 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 PRSS3P35030 304 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 ERFP50548 548 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 RAB9AP51151 201 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 C21orf59P57076 290 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 UBE2MP61081 183 aaKnown RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 PPP1CAP62136 330 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 RPS15AP62244 130 aaKnown RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 INCA1Q0VD86 236 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 ITIH4Q14624 930 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 KRTAP25-1Q3LHN0 102 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 ZNF660Q6AZW8 331 aaPredicted RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 RWDD4Q6NW29 188 aaKnown RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 METAP1DQ6UB28 335 aaPredicted RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 C8orf31Q8N9H6 132 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 OR2M7Q8NG81 312 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 SFXN5Q8TD22 340 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 TSEN15Q8WW01 171 aaKnown RBP0.77□□□□□ -2.29
SMC4-219ENST00000487747 RAB1CQ92928 201 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 MCUR1Q96AQ8 359 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 RDH12Q96NR8 316 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 FANCEQ9HB96 536 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 HEBP1Q9NRV9 189 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 SLC22A7Q9Y694 548 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 JCADQ9P266 1359 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 DYSFO75923 2080 aa0.77□□□□□ -2.29
SMC4-219ENST00000487747 BRD4O60885 1362 aaPredicted RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 LOC102724200A0A096LPH7 203 aaPredicted RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 LSM1O15116 133 aaKnown RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 CDH16O75309 829 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 FCN3O75636 299 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 SNX4O95219 450 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 ERCC1P07992 297 aaPredicted RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 SLC35G6P0C7Q6 338 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 GFAPP14136 432 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 ZNF83P51522 516 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 FOXA1P55317 472 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 RPEL1Q2QD12 228 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 SPANXN2Q5MJ10 180 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 LDLRAD2Q5SZI1 272 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 CENPQQ7L2Z9 268 aaPredicted RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 SSX9Q7RTT3 188 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 RAB43Q86YS6 212 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 LRRC8AQ8IWT6 810 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 OR8K3Q8NH51 312 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 ACTL9Q8TC94 416 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 ASZ1Q8WWH4 475 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 DYNLL2Q96FJ2 89 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 SNF8Q96H20 258 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 ALS2CR12Q96Q35 445 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 PEBP4Q96S96 227 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 ABCG5Q9H222 651 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 VSIRQ9H7M9 311 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 RDH14Q9HBH5 336 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 MRPS30Q9NP92 439 aaKnown RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 NMRK1Q9NWW6 199 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 PTTG3PQ9NZH4 202 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 STX18Q9P2W9 335 aaKnown RBP0.76□□□□□ -2.29
SMC4-219ENST00000487747 RAB22AQ9UL26 194 aa0.76□□□□□ -2.29
SMC4-219ENST00000487747 BAZ1BQ9UIG0 1483 aaKnown RBP0.75□□□□□ -2.29
SMC4-219ENST00000487747 SPATA31E1Q6ZUB1 1445 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 IGKV1OR2-108A0A075B7D4 117 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 A0A0B4J2E0 115 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 SLC19A2O60779 497 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 TDP2O95551 362 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 NRASP01111 189 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 HRASP01112 189 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 KRASP01116 189 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 IFNW1P05000 195 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 TEAD1P28347 426 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 HMOX2P30519 316 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 AP1S2P56377 157 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 TAS2R39P59534 338 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 HMGN5P82970 282 aaKnown RBP0.75□□□□□ -2.29
SMC4-219ENST00000487747 MERTKQ12866 999 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 TPBGQ13641 420 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 TFDP2Q14188 446 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 PDZD11Q5EBL8 140 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 CCDC183Q5T5S1 534 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 LIN9Q5TKA1 542 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 HHATQ5VTY9 493 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 OR2T5Q6IEZ7 315 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 UNC93AQ86WB7 457 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 OR4D6Q8NGJ1 314 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 OR2T29Q8NH02 315 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 FAM81AQ8TBF8 368 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 MRPL48Q96GC5 212 aaKnown RBP0.75□□□□□ -2.29
SMC4-219ENST00000487747 UBE2E2Q96LR5 201 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 JSRP1Q96MG2 331 aaPredicted RBP0.75□□□□□ -2.29
SMC4-219ENST00000487747 OPALINQ96PE5 141 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 GSDMAQ96QA5 445 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 CD209Q9NNX6 404 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 INIPQ9NRY2 104 aa0.75□□□□□ -2.29
SMC4-219ENST00000487747 C20orf96Q9NUD7 363 aaPredicted RBP0.75□□□□□ -2.29
SMC4-219ENST00000487747 GCNT4Q9P109 453 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms