RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 EIF3GO75821 320 aaKnown RBP eCLIP2.17□□□□□ -2.06
TTC3-220ENST00000487711 CCNB2O95067 398 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 RCBTB2O95199 551 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 PLEKHA8P1O95397 391 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 TACSTD2P09758 323 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 CCL2P13500 99 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 CFHR2P36980 270 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 SLC1A2P43004 574 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 KCNJ3P48549 501 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 SSR4P51571 173 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 ESRRGP62508 458 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 SYCNQ0VAF6 134 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 TCP10Q12799 353 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 XRCC4Q13426 336 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 CASP8Q14790 479 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 SPA17Q15506 151 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 FKBP1CQ5VVH2 108 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 TTC23LQ6PF05 361 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 WDR59Q6PJI9 974 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 SPESP1Q6UW49 350 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 OAFQ86UD1 273 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 COMTD1Q86VU5 262 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 ERO1BQ86YB8 467 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 CD302Q8IX05 232 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 ST13P4Q8IZP2 240 aaPredicted RBP2.17□□□□□ -2.06
TTC3-220ENST00000487711 MYOCDQ8IZQ8 938 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 SYCE1Q8N0S2 351 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 JAGN1Q8N5M9 183 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 TTC29Q8NA56 475 aaPredicted RBP2.17□□□□□ -2.06
TTC3-220ENST00000487711 FBXO36Q8NEA4 188 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 OR4A15Q8NGL6 344 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 LYPD6BQ8NI32 183 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 ERMNQ8TAM6 284 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 TM4SF18Q96CE8 201 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 RMI2Q96E14 147 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 RBMXL1Q96E39 390 aaKnown RBP2.17□□□□□ -2.06
TTC3-220ENST00000487711 NRBF2Q96F24 287 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 CCDC42Q96M95 316 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 P2RX4Q99571 388 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 UCK2Q9BZX2 261 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 COA1Q9GZY4 146 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 OR52A5Q9H2C5 316 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 CSNK1G1Q9HCP0 422 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 HMG20AQ9NP66 347 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 ISYNA1Q9NPH2 558 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 DYRK4Q9NR20 520 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 LSM7Q9UK45 103 aaKnown RBP2.17□□□□□ -2.06
TTC3-220ENST00000487711 SNX12Q9UMY4 172 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 TMEM14AQ9Y6G1 99 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 LOC285556D6RIA3 1793 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 BRCA1P38398 1863 aaKnown RBP2.17□□□□□ -2.06
TTC3-220ENST00000487711 ADGRA3Q8IWK6 1321 aa2.17□□□□□ -2.06
TTC3-220ENST00000487711 DENND4AQ7Z401 1863 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 TRAV6A0A075B6T7 132 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 IGHV5-10-1A0A0J9YXX1 117 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 MIF4GDA9UHW6 222 aaKnown RBP2.16□□□□□ -2.06
TTC3-220ENST00000487711 CYTH3O43739 400 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CALUO43852 315 aaPredicted RBP2.16□□□□□ -2.06
TTC3-220ENST00000487711 GMDSO60547 372 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 E2F6O75461 281 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 IFNW1P05000 195 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 BCHEP06276 602 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 PAEPP09466 180 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 IGHV1-8P0DP01 117 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 LCN1P31025 176 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 HRH1P35367 487 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 SPAM1P38567 509 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 AQP2P41181 271 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 NBL1P41271 181 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CDKN2BP42772 138 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CSNK1A1P48729 337 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CRISP1P54107 249 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 TNNC1P63316 161 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 LCN2P80188 198 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 SARNPP82979 210 aaKnown RBP2.16□□□□□ -2.06
TTC3-220ENST00000487711 VAMP3Q15836 100 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 ZSCAN26Q16670 478 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 RPEL1Q2QD12 228 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 C18orf21Q32NC0 220 aaPredicted RBP2.16□□□□□ -2.06
TTC3-220ENST00000487711 CHRFAM7AQ494W8 412 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CCDC122Q5T0U0 273 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 ZNF684Q5T5D7 378 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 KPRPQ5T749 579 aaPredicted RBP2.16□□□□□ -2.06
TTC3-220ENST00000487711 PDPK2PQ6A1A2 396 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 MBOAT1Q6ZNC8 495 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 LINC00336Q6ZUF6 198 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 NEGR1Q7Z3B1 354 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 IFT20Q8IY31 132 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CMTM1Q8IZ96 169 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 SLC35F6Q8N357 371 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 LIX1Q8N485 282 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 INO80EQ8NBZ0 244 aaPredicted RBP2.16□□□□□ -2.06
TTC3-220ENST00000487711 TMEM104Q8NE00 496 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CAPSLQ8WWF8 208 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 ASZ1Q8WWH4 475 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 CACNG8Q8WXS5 425 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 FAM3DQ96BQ1 224 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 LRRC45Q96CN5 670 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 ACBD6Q9BR61 282 aa2.16□□□□□ -2.06
TTC3-220ENST00000487711 TM6SF2Q9BZW4 377 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms