RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 AGBL2Q5U5Z8 902 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 NANOGP8Q6NSW7 305 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 KCTD8Q6ZWB6 473 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 FOXRED2Q8IWF2 684 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 SDSLQ96GA7 329 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 ZNF799Q96GE5 643 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 Q96M85 177 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 SYT4Q9H2B2 425 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 GHITMQ9H3K2 345 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 KRCC1Q9NPI7 259 aaPredicted RBP9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 AIG1Q9NVV5 245 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 HHLA2Q9UM44 414 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 ADAM18Q9Y3Q7 739 aa9.41□□□□□ -0.9
ATPAF1-205ENST00000487193 PKD1P98161 4303 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 AP4M1O00189 453 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 ITM2AO43736 263 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 VIMP08670 466 aaKnown RBP9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 RBM34P42696 430 aaKnown RBP9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 ZNF616Q08AN1 781 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 FAM53AQ6NSI3 398 aaPredicted RBP9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 THAP5Q7Z6K1 395 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 OR6V1Q8N148 313 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 CD177Q8N6Q3 437 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 ZNF781Q8N8C0 355 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 CYB561A3Q8NBI2 242 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 OR5B12Q96R08 314 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 MICU1Q9BPX6 476 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 PAIP1Q9H074 479 aaKnown RBP9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 WDR55Q9H6Y2 383 aaPredicted RBP9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 SLAMF8Q9P0V8 285 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 KLK5Q9Y337 293 aaPredicted RBP9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 MED31Q9Y3C7 131 aa9.4□□□□□ -0.9
ATPAF1-205ENST00000487193 RFPL4AA6NLU0 287 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 RFPL4AL1F8VTS6 287 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 RIPK2O43353 540 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 ARHGDIBP52566 201 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 CBX1P83916 185 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 FOXE3Q13461 319 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 MAVSQ7Z434 540 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 ZNF676Q8N7Q3 588 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 DLX4Q92988 240 aaPredicted RBP9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 NUAK2Q9H093 628 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 DPM3Q9P2X0 92 aa9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
ATPAF1-205ENST00000487193 SMIM23A6NLE4 172 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 M0QX08 132 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 SLC1A7O00341 560 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 AHCYL1O43865 530 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 IGHG2P01859 326 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 SLC2A1P11166 492 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 IFI30P13284 250 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 DDOSTP39656 456 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 TAS2R41P59536 307 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 RBMY1FQ15415 496 aaKnown RBP9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 SLC18B1Q6NT16 456 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 CATSPERDQ86XM0 798 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 LINC00471Q8N535 108 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 C5orf56Q8N8D9 126 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 OR2AJ1Q8NGZ0 328 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 SPTSSAQ969W0 71 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 BPIFA2Q96DR5 249 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 ZNF570Q96NI8 536 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 TSSK2Q96PF2 358 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 RTL8AQ9BWD3 113 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 PAPOLGQ9BWT3 736 aaKnown RBP9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 CLEC7AQ9BXN2 247 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 PNRC2Q9NPJ4 139 aaKnown RBP9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 PYCARDQ9ULZ3 195 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 RHBDD3Q9Y3P4 386 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 CEPT1Q9Y6K0 416 aa9.38□□□□□ -0.91
ATPAF1-205ENST00000487193 ELANEP08246 267 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 SLC9A3P48764 834 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 SLC7A2P52569 658 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 SLURP1P55000 103 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 GNB1P62873 340 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 HNF4GQ14541 408 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 ACSM6Q6P461 480 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 OAFQ86UD1 273 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 ZNF561Q8N587 486 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 ARPC1AQ92747 370 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 OR4C12Q96R67 309 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 GNB4Q9HAV0 340 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 ACTR3BQ9P1U1 418 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 RIMS3Q9UJD0 308 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 A4GNTQ9UNA3 340 aa9.37□□□□□ -0.91
ATPAF1-205ENST00000487193 ANXA2P2A6NMY6 339 aa9.36□□□□□ -0.91
ATPAF1-205ENST00000487193 HSPA12AO43301 675 aa9.36□□□□□ -0.91
ATPAF1-205ENST00000487193 TBX1O43435 398 aa9.36□□□□□ -0.91
ATPAF1-205ENST00000487193 RBP4P02753 201 aa9.36□□□□□ -0.91
ATPAF1-205ENST00000487193 PRDX2P32119 198 aa9.36□□□□□ -0.91
ATPAF1-205ENST00000487193 FAM3AP98173 230 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms