RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 PNLDC1Q8NA58 520 aaKnown RBP10.73□□□□□ -0.69
COL3A1-206ENST00000487010 RPS10P5Q9NQ39 176 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 AMDHD2Q9Y303 409 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 STARD10Q9Y365 291 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 RHPN2P1A8MT19 583 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 SERPINE3A8MV23 424 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 ETV2O00321 342 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-206ENST00000487010 UBE2CO00762 179 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 S100A8P05109 93 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 SMIM6P0DI80 62 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 FOLR1P15328 257 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF44P15621 663 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 THBS4P35443 961 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 AKR1C3P42330 323 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 FOXL2P58012 376 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 EIF3IQ13347 325 aaKnown RBP10.73□□□□□ -0.69
COL3A1-206ENST00000487010 DMRTC1Q5HYR2 192 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 CARD17Q5XLA6 110 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 GALNTL5Q7Z4T8 443 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF561Q8N587 486 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF283Q8N7M2 679 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 OR9K2Q8NGE7 335 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 OR5D18Q8NGL1 313 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 FNDC9Q8TBE3 224 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 THAP3Q8WTV1 239 aaPredicted RBP10.73□□□□□ -0.69
COL3A1-206ENST00000487010 RLN3Q8WXF3 142 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 PRRX2Q99811 253 aa10.73□□□□□ -0.69
COL3A1-206ENST00000487010 FER1L5A0AVI2 2057 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 A0A1B0GX78 115 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 E9PLN8 166 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 MT-ND4LP03901 98 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 NAT2P11245 290 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 ECI1P42126 302 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 PPT1P50897 306 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 OR1D5P58170 312 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 TSC22D1Q15714 1073 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 KCNMB1Q16558 191 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 EIF2S3LQ2VIR3 472 aaKnown RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 C14orf28Q4W4Y0 310 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 D2HGDHQ8N465 521 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 DEFB119Q8N690 84 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 KDF1Q8NAX2 398 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 UBAC2Q8NBM4 344 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 ADPRHL1Q8NDY3 354 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SEMA6DQ8NFY4 1073 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SHDQ96IW2 340 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 MRGPRX4Q96LA9 322 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 NAA11Q9BSU3 229 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SMIM3Q9BZL3 60 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SDHAF3Q9NRP4 125 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 IGKV1D-8A0A087WSZ0 117 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 C5orf63A6NC05 138 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 RRP8O43159 456 aaKnown RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 TRAF3IP2O43734 574 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 CA11O75493 328 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 TSPAN15O95858 294 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 IFNA21P01568 189 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 CTSDP07339 412 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 AGAP20933 346 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SNCAP37840 140 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF41P51814 821 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 GRB2P62993 217 aaKnown RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 PPA1Q15181 289 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SLC25A53Q5H9E4 307 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 GGNBP1Q5YKI7 109 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 OGFOD3Q6PK18 319 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 RBMS3Q6XE24 437 aaKnown RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 Q6ZS52 159 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SLC16A13Q7RTY0 426 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SULF2Q8IWU5 870 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 COMMD1Q8N668 190 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 APCDD1LQ8NCL9 501 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 POC1BQ8TC44 478 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 LIN37Q96GY3 246 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 LYZL4Q96KX0 146 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF2Q9BSG1 426 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 TM2D1Q9BX74 207 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 ARV1Q9H2C2 271 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 SLC2A4RGQ9NR83 387 aa10.72□□□□□ -0.69
COL3A1-206ENST00000487010 FAM212BQ9NTI7 297 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF701Q9NV72 531 aaPredicted RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 LSM5Q9Y4Y9 91 aaKnown RBP10.72□□□□□ -0.69
COL3A1-206ENST00000487010 GON4LQ3T8J9 2241 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 C7orf77A4D0Y5 90 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 CRYM-AS1A6NIL9 109 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SHISA7A6NL88 538 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 STMND1H3BQB6 276 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SGCEO43556 437 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 OPN1LWP04000 364 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 S100A9P06702 114 aaKnown RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 S100A6P06703 90 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SERPINA2P20848 420 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 CD38P28907 300 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 UCP2P55851 309 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 CFHR1Q03591 330 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SMAD4Q13485 552 aaKnown RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms