RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PLEKHJ1Q9NW61 149 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 TREM2Q9NZC2 230 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 NPAP1Q9NZP6 1156 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 KIAA1456Q9P272 454 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PCTPQ9UKL6 214 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 TCRBV5S2A0A599 114 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 CIB4A0PJX0 185 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 FAM172BPA6NC97 362 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 NKX6-3A6NJ46 265 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF724A8MTY0 619 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 UPK1AO00322 258 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 SDHDO14521 159 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF195O14628 629 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 HIST1H2ABP04908 130 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 S100A8P05109 93 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 IFI6P09912 130 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 IL7RP16871 459 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF23P17027 643 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 COX5AP20674 150 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 IGHV1-2P23083 117 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 DCKP27707 260 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 EIF2B2P49770 351 aaKnown RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF83P51522 516 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 ZP1P60852 638 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 LSM6P62312 80 aaKnown RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 LCN2P80188 198 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 C2orf80Q0P641 193 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 EFNB3Q15768 340 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 HAGHQ16775 308 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM176BQ3YBM2 270 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 TECRLQ5HYJ1 363 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 C9orf135Q5VTT2 229 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 DCAF12L2Q5VW00 463 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 FAHD2BQ6P2I3 314 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 TEX38Q6PEX7 206 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 BTNL3Q6UXE8 466 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 HIST3H2AQ7L7L0 130 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 CALHM1Q8IU99 346 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 PGAM4Q8N0Y7 254 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 OR2L13Q8N349 312 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF433Q8N7K0 673 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 OR13C5Q8NGS8 318 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 OR4C3Q8NH37 302 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 OR51A7Q8NH64 312 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 STOML3Q8TAV4 291 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 PIGXQ8TBF5 258 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 GPR151Q8TDV0 419 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 C16orf78Q8WTQ4 265 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM45BQ96B21 275 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 OTUB1Q96FW1 271 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 MRPL48Q96GC5 212 aaKnown RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 FAHD2AQ96GK7 314 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 SH3YL1Q96HL8 342 aaPredicted RBP5.83□□□□□ -1.48
HDAC3-209ENST00000486618 MUS81Q96NY9 551 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 GPR78Q96P69 363 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 SOX7Q9BT81 388 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 SRXN1Q9BYN0 137 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 C1orf198Q9H425 327 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 TUBB1Q9H4B7 451 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 RAB9BQ9NP90 201 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 MIEF1Q9NQG6 463 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 SIRT7Q9NRC8 400 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 UBQLN4Q9NRR5 601 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 NECAP2Q9NVZ3 263 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 BABAM2Q9NXR7 383 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 VAPAQ9P0L0 249 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 PIPOXQ9P0Z9 390 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 EMCNQ9ULC0 261 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 B9D1Q9UPM9 204 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 LRP12Q9Y561 859 aa5.83□□□□□ -1.48
HDAC3-209ENST00000486618 LOC105371242A0A075B767 164 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 IGHV4-61A0A0C4DH41 118 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TRBV7-9A0A0J9YWB2 115 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 A0A1B0GV90 55 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 A0A1W2PQD3 144 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 A0A1W2PRG6 482 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM129A0AVI4 362 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 GXYLT2A0PJZ3 443 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CCT8L1PA6NM43 557 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF99A8MXY4 864 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 M0R1B8 84 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CCRL2O00421 344 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 MANBAO00462 879 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 SLC22A2O15244 555 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 NBR2O15453 112 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ARPC5O15511 151 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 LY6HO94772 140 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 SUPT7LO94864 414 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 NUDT14O95848 222 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 IFNA10P01566 189 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 IGKV1D-16P01601 117 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TCRBP04435 133 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 IFNA4P05014 189 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CREB1P16220 341 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 BGNP21810 368 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ARR3P36575 388 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 GPX4P36969 197 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 FGF8P55075 233 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM33P57088 247 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms