RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PRKDCP78527 4128 aaKnown RBP15.75■□□□□ 0.11
COL27A1-205ENST00000485397 MEIOCA2RUB1 952 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 PRR23D1E9PI22 279 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-205ENST00000485397 TSPAN9O75954 239 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 PRR23D2P0DMB1 279 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-205ENST00000485397 NDUFB7P17568 137 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 PAICSP22234 425 aaKnown RBP15.74■□□□□ 0.11
COL27A1-205ENST00000485397 DCTDP32321 178 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 SAA4P35542 130 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 MNAT1P51948 309 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 GINS1Q14691 196 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 TMEM179BQ7Z7N9 219 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 OR8B12Q8NGG6 310 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 FAM110DQ8TAY7 271 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-205ENST00000485397 MED30Q96HR3 178 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 ELL3Q9HB65 397 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-205ENST00000485397 ABCB9Q9NP78 766 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 NLKQ9UBE8 527 aa15.74■□□□□ 0.11
COL27A1-205ENST00000485397 A0A1W2PQ09 198 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 SIGLEC5O15389 551 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 RHBDL1O75783 438 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 PAHP00439 452 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 ACAA1P09110 424 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-205ENST00000485397 GABRA2P47869 451 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 UBE2E1P51965 193 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 PSMA6P60900 246 aaKnown RBP15.73■□□□□ 0.11
COL27A1-205ENST00000485397 EGR3Q06889 387 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 C1orf122Q6ZSJ8 110 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 C1QL4Q86Z23 238 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 ZDHHC23Q8IYP9 409 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 ARHGAP24Q8N264 748 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 ZNF454Q8N9F8 522 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 DUS3LQ96G46 650 aaKnown RBP15.73■□□□□ 0.11
COL27A1-205ENST00000485397 NSL1Q96IY1 281 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 CHID1Q9BWS9 393 aa15.73■□□□□ 0.11
COL27A1-205ENST00000485397 OR2AT4A6NND4 320 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 M0R1W7 72 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 CST1P01037 141 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 RAP2AP10114 183 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 GLRA1P23415 457 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 TGFBR2P37173 567 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 GPM6AP51674 278 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 HCCSP53701 268 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 CAV3P56539 151 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 DMRTC1Q5HYR2 192 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 SLC35E4Q6ICL7 350 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 CPOQ8IVL8 374 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 BBS1Q8NFJ9 593 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 OR5R1Q8NH85 324 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 C17orf50Q8WW18 174 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 HIST1H2AAQ96QV6 131 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 PPA2Q9H2U2 334 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 METTL8Q9H825 291 aaKnown RBP15.72■□□□□ 0.11
COL27A1-205ENST00000485397 LRP12Q9Y561 859 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 MAB21L2Q9Y586 359 aa15.72■□□□□ 0.11
COL27A1-205ENST00000485397 IGKV1D-17A0A075B6S4 117 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 ANKRD61A6NGH8 418 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 ZNF732B4DXR9 585 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 PSG2P11465 335 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 GK3PQ14409 553 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 CEP78Q5JTW2 689 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 NCR3LG1Q68D85 454 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 HCP5Q6MZN7 132 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 ADGRG5Q8IZF4 528 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 ZNRF1Q8ND25 227 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 FAM81AQ8TBF8 368 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 OR51I2Q9H344 312 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 ZNF222Q9UK12 451 aa15.71■□□□□ 0.11
COL27A1-205ENST00000485397 A0A0G2JK05 382 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 ARRDC5A6NEK1 342 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 ALOX5APP20292 161 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 RPS7P62081 194 aaKnown RBP15.7■□□□□ 0.1
COL27A1-205ENST00000485397 ACSM1Q08AH1 577 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 KRT77Q7Z794 578 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 BEND2Q8NDZ0 799 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 TMEM185AQ8NFB2 350 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 CCDC124Q96CT7 223 aaKnown RBP15.7■□□□□ 0.1
COL27A1-205ENST00000485397 CLPTM1LQ96KA5 538 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 LRGUKQ96M69 825 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 NIPAL2Q9H841 368 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 SIGLEC9Q9Y336 463 aa15.7■□□□□ 0.1
COL27A1-205ENST00000485397 H0YAE9 185 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 H3BUX3 64 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 PSMD9O00233 223 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 PRODHO43272 600 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 HMGN1P05114 100 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 OSMP13725 252 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 PAX6P26367 422 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 MAP2K3P46734 347 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 GNG3P63215 75 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 CDK5Q00535 292 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 BLMHQ13867 455 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 LY6EQ16553 131 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 SLC35D3Q5M8T2 416 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 HIST2H2BDQ6DRA6 164 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 HS3ST5Q8IZT8 346 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 FAM185AQ8N0U4 392 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 PAPD5Q8NDF8 572 aaKnown RBP15.69■□□□□ 0.1
COL27A1-205ENST00000485397 RORBQ92753 470 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 ASB9Q96DX5 294 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms