RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 GOLGA8QA0A0J9YX86 632 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 BET1O15155 118 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 TCAPO15273 167 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 RAD51BO15315 384 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 SC5DO75845 299 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 PTTG1O95997 202 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 TRBV12-3P01733 135 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 IGHV3-11P01762 117 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 HLA-DQA1P01909 254 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 MT-ND4P03905 459 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 CISD3P0C7P0 127 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 OR56A5P0C7T3 313 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 CD9P21926 228 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 LCN1P31025 176 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 POLR2IP36954 125 aaKnown RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 RANBP1P43487 201 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 INCA1Q0VD86 236 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 TRDNQ13061 729 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 STX3Q13277 289 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 DYNC1I2Q13409 638 aaKnown RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 MAD2L1BPQ15013 274 aaPredicted RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 ANGPT1Q15389 498 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 RBMY1FQ15415 496 aaKnown RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 CDNFQ49AH0 187 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 KPRPQ5T749 579 aaPredicted RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 SYT6Q5T7P8 510 aaPredicted RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 AP1ARQ63HQ0 302 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 NANOGP8Q6NSW7 305 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 GUSBP11Q6P575 273 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 OPN5Q6U736 354 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 TMEM205Q6UW68 189 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 NTM-AS1Q6ZSK4 140 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 WDFY1Q8IWB7 410 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 UBALD2Q8IYN6 164 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 C17orf78Q8N4C9 275 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 OR6N1Q8NGY5 312 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 SFXN5Q8TD22 340 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 DCAKDQ8WVC6 231 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 RXFP2Q8WXD0 754 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 CDS1Q92903 461 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 ZNF488Q96MN9 340 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 Q96MT0 163 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 ZNF396Q96N95 335 aaPredicted RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 METTL8Q9H825 291 aaKnown RBP2.29□□□□□ -2.04
SMC4-215ENST00000484799 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 RMND1Q9NWS8 449 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 ENOPH1Q9UHY7 261 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 VAX2Q9UIW0 290 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 ZNF222Q9UK12 451 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 SIGLEC7Q9Y286 467 aa2.29□□□□□ -2.04
SMC4-215ENST00000484799 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 A0A1B0GW15 77 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 MGAT4DA6NG13 374 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 TVP23AA6NH52 213 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 M0R1B8 84 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 RRP8O43159 456 aaKnown RBP2.28□□□□□ -2.04
SMC4-215ENST00000484799 GATBO75879 557 aaKnown RBP2.28□□□□□ -2.04
SMC4-215ENST00000484799 CTDNEP1O95476 244 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 CD5P06127 495 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 C1GALT1C1LP0DN25 315 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 P2RY2P41231 377 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 PRLHRP49683 370 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 PSMB2P49721 201 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 CYP24A1Q07973 514 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 SIGLEC14Q08ET2 396 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 SYCNQ0VAF6 134 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 TNXAQ16473 311 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 YIF1BQ5BJH7 314 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 IDNKQ5T6J7 187 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 HHATQ5VTY9 493 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 CLEC6AQ6EIG7 209 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 WDR86Q86TI4 376 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 COMTD1Q86VU5 262 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 ERO1BQ86YB8 467 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 NELFCDQ8IXH7 590 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 RIMKLAQ8IXN7 391 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 LGI3Q8N145 548 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 CYB561D1Q8N8Q1 229 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 OR4M1Q8NGD0 313 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 OR4K5Q8NGD3 323 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 OR4D6Q8NGJ1 314 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 NT5CQ8TCD5 201 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 RNF157Q96PX1 679 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 OR2M4Q96R27 311 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 OR4K3Q96R72 315 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 RBBP8Q99708 897 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 PDCD1LG2Q9BQ51 273 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 ACBD6Q9BR61 282 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 FRMD8P1Q9BZ68 369 aaPredicted RBP2.28□□□□□ -2.04
SMC4-215ENST00000484799 CHRNA10Q9GZZ6 450 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 CD300AQ9UGN4 299 aa2.28□□□□□ -2.04
SMC4-215ENST00000484799 SIGLEC1Q9BZZ2 1709 aa2.28□□□□□ -2.05
SMC4-215ENST00000484799 ZNF608Q9ULD9 1512 aaPredicted RBP2.27□□□□□ -2.05
SMC4-215ENST00000484799 COL1A2P08123 1366 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 TRAV8-6A0A0B4J262 113 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 IGHV7-4-1A0A0J9YVY3 117 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 OR5H1A6NKK0 313 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 IQCF5A8MTL0 148 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 NDUFC2-KCTD14E9PQ53 114 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms