RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 OR51G2Q8NGK0 314 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 OR2T29Q8NH02 315 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 THEM6Q8WUY1 208 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 OR5P3Q8WZ94 311 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 TNFRSF14Q92956 283 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 HIST1H2AAQ96QV6 131 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 NIPSNAP1Q9BPW8 284 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 MAGIXQ9H6Y5 334 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 ELL3Q9HB65 397 aaPredicted RBP10.84□□□□□ -0.67
VCL-205ENST00000478896 ARL8BQ9NVJ2 186 aa10.84□□□□□ -0.67
VCL-205ENST00000478896 OR2AT4A6NND4 320 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 ANGPTL7O43827 346 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 SELENOFO60613 162 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 CST4P01036 141 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 ACKR3P25106 362 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 GPM6AP51674 278 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 CAPZA1P52907 286 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 CAV3P56539 151 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 HERPUD1Q15011 391 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 LY6EQ16553 131 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
VCL-205ENST00000478896 COMMD2Q86X83 199 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 BEND2Q8NDZ0 799 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 OR8B12Q8NGG6 310 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 OR4C13Q8NGP0 309 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 ANGPTL6Q8NI99 470 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 HPSE2Q8WWQ2 592 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 DUS3LQ96G46 650 aaKnown RBP10.83□□□□□ -0.68
VCL-205ENST00000478896 SSX3Q99909 188 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 FAM234AQ9H0X4 552 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 VNN3Q9NY84 501 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 FBLN5Q9UBX5 448 aa10.83□□□□□ -0.68
VCL-205ENST00000478896 SF3B6Q9Y3B4 125 aaKnown RBP10.83□□□□□ -0.68
VCL-205ENST00000478896 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 PRR23D1E9PI22 279 aaPredicted RBP10.82□□□□□ -0.68
VCL-205ENST00000478896 DCTN3O75935 186 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 ACAA1P09110 424 aaPredicted RBP10.82□□□□□ -0.68
VCL-205ENST00000478896 PRR23D2P0DMB1 279 aaPredicted RBP10.82□□□□□ -0.68
VCL-205ENST00000478896 PSMA6P60900 246 aaKnown RBP10.82□□□□□ -0.68
VCL-205ENST00000478896 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
VCL-205ENST00000478896 CEP78Q5JTW2 689 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 C1orf122Q6ZSJ8 110 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 C11orf44Q8N8P7 122 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 OR5D13Q8NGL4 314 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 OR2T6Q8NHC8 308 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 OTOSQ8NHW6 89 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 CLPTM1LQ96KA5 538 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 MUC13Q9H3R2 512 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 RAB18Q9NP72 206 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 TAS2R1Q9NYW7 299 aa10.82□□□□□ -0.68
VCL-205ENST00000478896 TRBV23-1A0A0A0MS06 115 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 ZNF732B4DXR9 585 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 RHBDL1O75783 438 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 GNG3P63215 75 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 LRRC75BQ2VPJ9 315 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 PLBD1Q6P4A8 553 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 KRT77Q7Z794 578 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 DHFR2Q86XF0 187 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 ZNF454Q8N9F8 522 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 ZNF671Q8TAW3 534 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 GIPC3Q8TF64 312 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 C17orf50Q8WW18 174 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 RORBQ92753 470 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 LYZL4Q96KX0 146 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 FGF23Q9GZV9 251 aaPredicted RBP10.81□□□□□ -0.68
VCL-205ENST00000478896 NIPAL2Q9H841 368 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 LAMP5Q9UJQ1 280 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 FOXJ3Q9UPW0 622 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 ARL2BPQ9Y2Y0 163 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 SIGLEC9Q9Y336 463 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 LRP12Q9Y561 859 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 MAB21L2Q9Y586 359 aa10.81□□□□□ -0.68
VCL-205ENST00000478896 IGKV1D-17A0A075B6S4 117 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 A0A1W2PPH5 198 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 G3V4G9 280 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 PSG2P11465 335 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 DCTDP32321 178 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 MAP2K3P46734 347 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 MNAT1P51948 309 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 FAM76BQ5HYJ3 339 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 PLCXD3Q63HM9 321 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 LCN8Q6JVE9 175 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 C11orf88Q6PI97 169 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 THAP5Q7Z6K1 395 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 KLHDC1Q8N7A1 406 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 LRGUKQ96M69 825 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 FEVQ99581 238 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 RANBP3Q9H6Z4 567 aaPredicted RBP10.8□□□□□ -0.68
VCL-205ENST00000478896 YY1AP1Q9H869 796 aa10.8□□□□□ -0.68
VCL-205ENST00000478896 PRKDCP78527 4128 aaKnown RBP10.8□□□□□ -0.68
VCL-205ENST00000478896 GNGT2O14610 69 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 PRODHO43272 600 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 CST1P01037 141 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 OPN1MWP04001 364 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 OPN1MW2P0DN77 364 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 OPN1MW3P0DN78 364 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 VSIG10L2P0DP72 767 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 PAX6P26367 422 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 EFNB2P52799 333 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms