RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 NKX2-6A6NCS4 301 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SLC22A20A6NK97 555 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 FAM74A7A6NL05 159 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 DHRS7CA6NNS2 312 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ZSWIM8A7E2V4 1837 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 CLDN25C9JDP6 229 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 F6UZH7 168 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 J3QRK9 145 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 K7ERU9 68 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 M0R3G1 203 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 FAAHO00519 579 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SOCS3O14543 225 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ZNF195O14628 629 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PHOX2AO14813 284 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 BCL2L11O43521 198 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PDE6DO43924 150 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SOX15O60248 233 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SLC19A2O60779 497 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 STK16O75716 305 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 MMP23AO75900 390 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 KCNK2O95069 426 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 LRATO95237 230 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SYNGR4O95473 234 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 GYPCP04921 128 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 IFNW1P05000 195 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 KLK1P06870 262 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 CSN3P07498 182 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 RHOCP08134 193 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 METP08581 1390 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SNRPCP09234 159 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 SLC35G4P0C7Q5 338 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR56A5P0C7T3 313 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 MYL2P10916 166 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 MYH3P11055 1940 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 TDGF1P13385 188 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 IRF2P14316 349 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ALOX5APP20292 161 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ZBTB25P24278 435 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PSMA1P25786 263 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 HMGB2P26583 209 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 APLNRP35414 380 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 NBL1P41271 181 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 CDKN2BP42772 138 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 GYG1P46976 350 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 DAP3P51398 398 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 LBX1P52954 281 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ATP1B3P54709 279 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 NAPAP54920 295 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 BIDP55957 195 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 RAB5BP61020 215 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 RAB10P61026 200 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 RPS15AP62244 130 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 RPS18P62269 152 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 TBPL1P62380 186 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 NTHL1P78549 312 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 MRPS34P82930 218 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 CDK5Q00535 292 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PTPRJQ12913 1337 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 NFATC2Q13469 925 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 C1orf61Q13536 156 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR2F1Q13607 317 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SPA17Q15506 151 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ZNF74Q16587 644 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PRSS8Q16651 343 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 FAM74A3Q4VXF1 159 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PYCR3Q53H96 274 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 PYY3Q5JQD4 70 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 C6orf52Q5T4I8 152 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 HENMT1Q5T8I9 393 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 FAM78BQ5VT40 261 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 LIPKQ5VXJ0 399 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 STEAP4Q687X5 459 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 KDM4DQ6B0I6 523 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 C22orf42Q6IC83 251 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR4A47Q6IF82 309 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 LCN10Q6JVE6 187 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 SMARCD3Q6STE5 483 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 CASP12Q6UXS9 341 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 Q6ZSR3 168 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 TMPPEQ6ZT21 453 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 TPRG1Q6ZUI0 275 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ASCL5Q7RTU5 278 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ZFYVE16Q7Z3T8 1539 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 DENND4AQ7Z401 1863 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 ARPINQ7Z6K5 226 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 CCDC190Q86UF4 302 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 TMEM173Q86WV6 379 aaPredicted RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 HOGA1Q86XE5 327 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 MEX3DQ86XN8 651 aaKnown RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 PLEKHH2Q8IVE3 1493 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 UBALD2Q8IYN6 164 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 LRRC25Q8N386 305 aaPredicted RBP2.04□□□□□ -2.08
XRN1-211ENST00000477237 POM121L12Q8N7R1 296 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 GPR32P1Q8NGA4 272 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR4E2Q8NGC2 313 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR4D9Q8NGE8 314 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR4A4PQ8NGN8 299 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR13C4Q8NGS5 318 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR6N1Q8NGY5 312 aa2.04□□□□□ -2.08
XRN1-211ENST00000477237 OR4C3Q8NH37 302 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms