RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 OR13C9Q8NGT0 318 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 ZNF420Q8TAQ5 688 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-224ENST00000475524 RAB2BQ8WUD1 216 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 NINJ1Q92982 152 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 MEGF10Q96KG7 1140 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 CHCHD6Q9BRQ6 235 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 TLNRD1Q9H1K6 362 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 EXOSC4Q9NPD3 245 aaKnown RBP12.87□□□□□ -0.35
MCF2L-224ENST00000475524 GPR173Q9NS66 373 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 ZNF701Q9NV72 531 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-224ENST00000475524 NDUFA13Q9P0J0 144 aa12.87□□□□□ -0.35
MCF2L-224ENST00000475524 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 LRP5LA4QPB2 252 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 SPRY3O43610 288 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 TMEM127O75204 238 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 OCMP0CE72 109 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 CALRP27797 417 aaKnown RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 RBP2P50120 134 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 ATP1B3P54709 279 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 INSL4Q14641 139 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 CEP78Q5JTW2 689 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 SLC16A12Q6ZSM3 486 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 OR10AD1Q8NGE0 317 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 GTF3AQ92664 365 aaKnown RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 FOXRED1Q96CU9 486 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 BORCS8Q96FH0 119 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 RNF170Q96K19 258 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 OR2V2Q96R30 315 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 PKIBQ9C010 78 aa12.86□□□□□ -0.35
MCF2L-224ENST00000475524 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 CHD3Q12873 2000 aaKnown RBP12.86□□□□□ -0.35
MCF2L-224ENST00000475524 SMIM31A0A1B0GVY4 71 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 A6NIN4 97 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 F5H5P2 479 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 H0YL77 283 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-224ENST00000475524 PDCD5O14737 125 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 ACAA1P09110 424 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-224ENST00000475524 CFPP27918 469 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 CFHR2P36980 270 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 MAB21L1Q13394 359 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 FAM27D1Q5T7N8 215 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 GPR107Q5VW38 600 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 HIST2H2BCQ6DN03 193 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 LRRTM1Q86UE6 522 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 SATL1Q86VE3 508 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 Q8TCH9 128 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 SORCS2Q96PQ0 1159 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 UQCC2Q9BRT2 126 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 PPIL3Q9H2H8 161 aaKnown RBP12.85□□□□□ -0.35
MCF2L-224ENST00000475524 SAP30LQ9HAJ7 183 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 BARX1Q9HBU1 254 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-224ENST00000475524 DECR2Q9NUI1 292 aa12.85□□□□□ -0.35
MCF2L-224ENST00000475524 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-224ENST00000475524 DCHS2Q6V1P9 2916 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 LOC100506127A0A0U1RQW1 187 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 LOC100289279A0A1B0GTE1 492 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 ZNF732B4DXR9 585 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 J3QT63 122 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
MCF2L-224ENST00000475524 HCKP08631 526 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 MPZP25189 248 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 THBS2P35442 1172 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 GPM6AP51674 278 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 EFNA4P52798 201 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 ZNF154Q13106 437 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 RIN1Q13671 783 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 CTF1Q16619 201 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 GLT8D1Q68CQ7 371 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 SAXO1Q8IYX7 474 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 ZSCAN4Q8NAM6 433 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-224ENST00000475524 OR51A2Q8NGJ7 313 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 ITLN1Q8WWA0 313 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
MCF2L-224ENST00000475524 HPS1Q92902 700 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-224ENST00000475524 CENPOQ9BU64 300 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 GSX2Q9BZM3 304 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 FGF23Q9GZV9 251 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-224ENST00000475524 OR51I2Q9H344 312 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 TPK1Q9H3S4 243 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 METTL17Q9H7H0 456 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-224ENST00000475524 PPP1R3EQ9H7J1 279 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 FN3KRPQ9HA64 309 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 RHOFQ9HBH0 211 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 DLL4Q9NR61 685 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 POLDIP2Q9Y2S7 368 aa12.84□□□□□ -0.35
MCF2L-224ENST00000475524 SLC22A1O15245 554 aa12.83□□□□□ -0.36
MCF2L-224ENST00000475524 NCR1O76036 304 aa12.83□□□□□ -0.36
MCF2L-224ENST00000475524 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-224ENST00000475524 IL1AP01583 271 aa12.83□□□□□ -0.36
MCF2L-224ENST00000475524 ADRA2CP18825 462 aa12.83□□□□□ -0.36
MCF2L-224ENST00000475524 DNASE1P24855 282 aa12.83□□□□□ -0.36
MCF2L-224ENST00000475524 MTCP1P56278 107 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms