RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 COL5A1P20908 1838 aaPredicted RBP12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 IGKV1-9A0A0C4DH69 117 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 C10orf142B7Z368 130 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 H3BMH7 237 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 DEDDO75618 318 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 SERPINA2P20848 420 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 FOXL2P58012 376 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 HGFACQ04756 655 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 C1QL2Q7Z5L3 287 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 SGPP2Q8IWX5 399 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 FAM89BQ8N5H3 189 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 NOXO1Q8NFA2 376 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 ELL3Q9HB65 397 aaPredicted RBP12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 B3GAT1Q9P2W7 334 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 C7orf77A4D0Y5 90 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 NME2P1O60361 137 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 IGHG1P01857 330 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 FAM3AP98173 230 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF616Q08AN1 781 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 TGIF1Q15583 401 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 DEFB133Q30KQ1 61 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 MIDNQ504T8 468 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 SULF2Q8IWU5 870 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 ISOC2Q96AB3 205 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 C20orf24Q9BUV8 137 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 CHRNA10Q9GZZ6 450 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 FAM212BQ9NTI7 297 aaPredicted RBP12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 A6NLC8 198 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 FABP9Q0Z7S8 132 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 KISS1Q15726 138 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 CLEC9AQ6UXN8 241 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 DEFB119Q8N690 84 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 SEMA6DQ8NFY4 1073 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 S100A13Q99584 98 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF2Q9BSG1 426 aaPredicted RBP12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 SPACA1Q9HBV2 294 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 GSN-AS1Q9NRJ2 163 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
NHLRC3-204ENST00000473371 A0A1W2PPH5 198 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 EPOPA6NHQ4 379 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 RHPN2P1A8MT19 583 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 STMND1H3BQB6 276 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 DAOP14920 347 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 MYBPHQ13203 477 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 MRPL24Q96A35 216 aaKnown RBP12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 LIN37Q96GY3 246 aaPredicted RBP12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 EIF5A2Q9GZV4 153 aaKnown RBP12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 PISDQ9UG56 409 aa12.52□□□□□ -0.4
NHLRC3-204ENST00000473371 A0A1W2PNV4 684 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 NAT2P11245 290 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 GUK1Q16774 197 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 RLN3Q8WXF3 142 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 ERGIC1Q969X5 290 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 PGAM5Q96HS1 289 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 IP6K3Q96PC2 410 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 STARD10Q9Y365 291 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 PGA4P0DJD7 388 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 PGA3P0DJD8 388 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 AGAP20933 346 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 SNCAP37840 140 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 GLP1RP43220 463 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 OR14K1Q8NGZ2 314 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
NHLRC3-204ENST00000473371 IGKV1D-8A0A087WSZ0 117 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 EFNA2O43921 213 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 CCL1P22362 96 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 ZNF41P51814 821 aaPredicted RBP12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 SUMO3P55854 103 aaPredicted RBP12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 UBAC2Q8NBM4 344 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 PLEKHA2Q9HB19 425 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 SDHAF3Q9NRP4 125 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 KLRF1Q9NZS2 232 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 TUBD1Q9UJT1 453 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 TRAV20A0A0B4J274 112 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 METTL12A8MUP2 240 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 NME1P15531 152 aaKnown RBP12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 THBS4P35443 961 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 CAMLGP49069 296 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 SHDQ96IW2 340 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
NHLRC3-204ENST00000473371 FOXI3A8MTJ6 420 aaPredicted RBP12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 CTSDP07339 412 aaPredicted RBP12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 PRF1P14222 555 aa12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 FOSL2P15408 326 aa12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 ECI1P42126 302 aa12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 FAM209BQ5JX69 171 aa12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 COMMD1Q8N668 190 aa12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 PNRC2Q9NPJ4 139 aaKnown RBP12.5□□□□□ -0.41
NHLRC3-204ENST00000473371 SLC2A4RGQ9NR83 387 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms