RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 ZDHHC16Q969W1 377 aa16.16■□□□□ 0.18
COMMD1-208ENST00000472729 SLC25A28Q96A46 364 aa16.16■□□□□ 0.18
COMMD1-208ENST00000472729 MED30Q96HR3 178 aa16.16■□□□□ 0.18
COMMD1-208ENST00000472729 TLNRD1Q9H1K6 362 aa16.16■□□□□ 0.18
COMMD1-208ENST00000472729 ZMAT3Q9HA38 289 aaKnown RBP16.16■□□□□ 0.18
COMMD1-208ENST00000472729 KAAG1Q9UBP8 84 aa16.16■□□□□ 0.18
COMMD1-208ENST00000472729 OR52A1Q9UKL2 312 aa16.16■□□□□ 0.18
COMMD1-208ENST00000472729 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.16■□□□□ 0.18
COMMD1-208ENST00000472729 TANC2Q9HCD6 1990 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 OR5B21A6NL26 309 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 C22orf46C9J442 243 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 P2RY10O00398 339 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 GPR37O15354 613 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 DHRS3O75911 302 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 NRASP01111 189 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 IGHV4-38-2P0DP08 117 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 GLRA1P23415 457 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 POLR2IP36954 125 aaKnown RBP16.15■□□□□ 0.18
COMMD1-208ENST00000472729 TMED1Q13445 227 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 WDR38Q5JTN6 314 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 DOK3Q7L591 496 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 FAM220AQ7Z4H9 259 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 CMTM4Q8IZR5 234 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 OR5T2Q8NGG2 359 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 TRUB1Q8WWH5 349 aaKnown RBP16.15■□□□□ 0.18
COMMD1-208ENST00000472729 RAB3IPQ96QF0 476 aaPredicted RBP16.15■□□□□ 0.18
COMMD1-208ENST00000472729 PLEKHA1Q9HB21 404 aa16.15■□□□□ 0.18
COMMD1-208ENST00000472729 SRRM5B3KS81 715 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 AKR7A2O43488 359 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 FAHP16930 419 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 UBA52P62987 128 aaKnown RBP16.14■□□□□ 0.17
COMMD1-208ENST00000472729 MFGE8Q08431 387 aaPredicted RBP16.14■□□□□ 0.17
COMMD1-208ENST00000472729 CLVS2Q5SYC1 327 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 ELMOD2Q8IZ81 293 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 BCL6BQ8N143 479 aaPredicted RBP16.14■□□□□ 0.17
COMMD1-208ENST00000472729 C3orf56Q8N813 242 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 TMIGD2Q96BF3 282 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 CNTD2Q9H8S5 307 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 SMURF1Q9HCE7 757 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 SNTG1Q9NSN8 517 aa16.14■□□□□ 0.17
COMMD1-208ENST00000472729 A0A1B0GVI7 797 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 A0A1W2PQL4 384 aaPredicted RBP16.13■□□□□ 0.17
COMMD1-208ENST00000472729 METTL15A6NJ78 407 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 TNFRSF13BO14836 293 aaPredicted RBP16.13■□□□□ 0.17
COMMD1-208ENST00000472729 MAGEB4O15481 346 aaPredicted RBP16.13■□□□□ 0.17
COMMD1-208ENST00000472729 TTRP02766 147 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 PRTN3P24158 256 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 PDCD1Q15116 288 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 FAM76BQ5HYJ3 339 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 PLEKHG7Q6ZR37 379 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 ZNF573Q86YE8 665 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 HPSE2Q8WWQ2 592 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 GATAD2BQ8WXI9 593 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 H1FXQ92522 213 aaKnown RBP16.13■□□□□ 0.17
COMMD1-208ENST00000472729 PPP1R14AQ96A00 147 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 WDFY2Q96P53 400 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 MYCBPQ99417 103 aaPredicted RBP16.13■□□□□ 0.17
COMMD1-208ENST00000472729 DNTTIP1Q9H147 329 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 ONECUT1Q9UBC0 465 aa16.13■□□□□ 0.17
COMMD1-208ENST00000472729 MRM2Q9UI43 246 aaKnown RBP16.13■□□□□ 0.17
COMMD1-208ENST00000472729 PRR32B1ATL7 298 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 EI24O14681 340 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 SULT1C4O75897 302 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 APOL3O95236 402 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 ALPLP05186 524 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 GABRA2P47869 451 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 ALDH3A2P51648 485 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 ARF6P62330 175 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 IL13RA1P78552 427 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 ODF4Q2M2E3 257 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 MEDAGQ5VYS4 303 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 HAGHLQ6PII5 290 aaPredicted RBP16.12■□□□□ 0.17
COMMD1-208ENST00000472729 C9orf139Q6ZV77 190 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 FAM216BQ8N7L0 139 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 ZDHHC22Q8N966 263 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 DACT3Q96B18 629 aaPredicted RBP16.12■□□□□ 0.17
COMMD1-208ENST00000472729 DUX5Q96PT3 197 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 OR51I2Q9H344 312 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 NLKQ9UBE8 527 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 SLC7A11Q9UPY5 501 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 POLDIP2Q9Y2S7 368 aa16.12■□□□□ 0.17
COMMD1-208ENST00000472729 DNAJC9-AS1A6NH13 148 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 DLGAP1O14490 977 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 SYT7O43581 403 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 PLATP00750 562 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 SERPINA3P01011 423 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 NDUFB7P17568 137 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 ACTC1P68032 377 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 ACTA1P68133 377 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 ZIK1Q3SY52 487 aaPredicted RBP16.11■□□□□ 0.17
COMMD1-208ENST00000472729 ATPAF1Q5TC12 328 aaPredicted RBP16.11■□□□□ 0.17
COMMD1-208ENST00000472729 BRD3OSQ6XYD6 125 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 CBR4Q8N4T8 237 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 EME1Q96AY2 570 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 SEH1LQ96EE3 360 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 MRPL48Q96GC5 212 aaKnown RBP16.11■□□□□ 0.17
COMMD1-208ENST00000472729 C9orf16Q9BUW7 83 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 WDR13Q9H1Z4 485 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 ESM1Q9NQ30 184 aa16.11■□□□□ 0.17
COMMD1-208ENST00000472729 RASL12Q9NYN1 266 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms