RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, human

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIK3-208	ENST00000472648	MRAS	O14807	208 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	LYPD3	O95274	346 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	RPLP1	P05386	114 aa	Known RBP	4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	TSPAN19	P0C672	248 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	OR8U8	P0C7N1	319 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	BMP2	P12643	396 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	COX4I1	P13073	169 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	CD247	P20963	164 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	AQP1	P29972	269 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	NUDT2	P50583	147 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	CDK6	Q00534	326 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	ZNF92	Q03936	586 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	GABPB1	Q06547	395 aa	Predicted RBP	4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	FHL3	Q13643	280 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	PMS2P11	Q13670	270 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	CYP51A1	Q16850	503 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	GTDC1	Q4AE62	458 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	GCNT6	Q5T4J0	391 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	TMEM200B	Q69YZ2	307 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	SLC2A7	Q6PXP3	512 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	CFAP77	Q6ZQR2	320 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	FOXRED2	Q8IWF2	684 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	DPP10	Q8N608	796 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	SMYD1	Q8NB12	490 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	OR11H1	Q8NG94	326 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	OR11H6	Q8NGC7	330 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	OR56B2P	Q8NGI1	322 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	OR6T1	Q8NGN1	323 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	OR2AE1	Q8NHA4	323 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	TSPEAR	Q8WU66	669 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	C1orf21	Q9H246	121 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	TBC1D23	Q9NUY8	699 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	NDE1	Q9NXR1	346 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	SLAMF8	Q9P0V8	285 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	NLK	Q9UBE8	527 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	TAGLN3	Q9UI15	199 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	LINC00527	Q9UJ94	153 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	A4GNT	Q9UNA3	340 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	MOB4	Q9Y3A3	225 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	HSPE1-MOB4	S4R3N1	261 aa		4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	DYNC1H1	Q14204	4646 aa	Known RBP	4.57	□□□□□ -1.68
SIK3-208	ENST00000472648	CLIC1	O00299	241 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	EBAG9	O00559	213 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	OVOL1	O14753	267 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	GSTA4	O15217	222 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	AKR7A2	O43488	359 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	PSPN	O60542	156 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	KHDRBS3	O75525	346 aa	Known RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	NPPA	P01160	153 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	ARSB	P15848	533 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	GLRA1	P23415	457 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	HTR1D	P28221	377 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	IL12A	P29459	219 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	PRDX6	P30041	224 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	RBM34	P42696	430 aa	Known RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	CDX1	P47902	265 aa	Predicted RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	MRPL19	P49406	292 aa	Known RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	CENPA	P49450	140 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	RASSF2	P50749	326 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	TPTE	P56180	551 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	TRAP1	Q12931	704 aa	Known RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	SCARB2	Q14108	478 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	ZNF273	Q14593	569 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	KRT72	Q14CN4	511 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	SNAI3	Q3KNW1	292 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	GLYATL3	Q5SZD4	288 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	LCN8	Q6JVE9	175 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	PGM2L1	Q6PCE3	622 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	CORO6	Q6QEF8	472 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	ACP7	Q6ZNF0	438 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	TRPM8	Q7Z2W7	1104 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	NAA40	Q86UY6	237 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	CALHM1	Q8IU99	346 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	OR4M1	Q8NGD0	313 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	OR10Z1	Q8NGY1	313 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	OR2T27	Q8NH04	317 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	C4orf3	Q8WVX3	66 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	LIPH	Q8WWY8	451 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	GTF2H4	Q92759	462 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	SPTSSA	Q969W0	71 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	RCN3	Q96D15	328 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	NSL1	Q96IY1	281 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	PITX2	Q99697	317 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	HOPX	Q9BPY8	73 aa	Predicted RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	PRSS27	Q9BQR3	290 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	GHITM	Q9H3K2	345 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	OPA3	Q9H6K4	179 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	VSX1	Q9NZR4	365 aa	Predicted RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	KIAA1456	Q9P272	454 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	GRHPR	Q9UBQ7	328 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	COA3	Q9Y2R0	106 aa	Predicted RBP	4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	AP3M1	Q9Y2T2	418 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	MED31	Q9Y3C7	131 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	LHFPL6	Q9Y693	200 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	HSPG2	P98160	4391 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	FAT2	Q9NYQ8	4349 aa		4.56	□□□□□ -1.68
SIK3-208	ENST00000472648	PKD1	P98161	4303 aa		4.55	□□□□□ -1.68
SIK3-208	ENST00000472648	IGKV1D-17	A0A075B6S4	117 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms