RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 IDH3BO43837 385 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 NDUFB7P17568 137 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 GRK5P34947 590 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 DDOSTP39656 456 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 CAV3P56539 151 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 BLCAPP62952 87 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 AANATQ16613 207 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 TMEM95Q3KNT9 176 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 NCR3LG1Q68D85 454 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 RNF144BQ7Z419 303 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 SLC37A3Q8NCC5 494 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 HPSE2Q8WWQ2 592 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 OR5P3Q8WZ94 311 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 FAM162AQ96A26 154 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 LYZL4Q96KX0 146 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 OR5M11Q96RB7 305 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 CDCA4Q9BXL8 241 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 GPR61Q9BZJ8 451 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 NMNAT2Q9BZQ4 307 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 DNTTIP1Q9H147 329 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 FAM32AQ9Y421 112 aaKnown RBP7.51□□□□□ -1.21
VCL-204ENST00000472585 OR2AT4A6NND4 320 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 CLIC3O95833 236 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 SPARCP09486 303 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 PSG2P11465 335 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 COX4I1P13073 169 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 LMO1P25800 156 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 POU1F1P28069 291 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
VCL-204ENST00000472585 NAA10P41227 235 aaPredicted RBP7.5□□□□□ -1.21
VCL-204ENST00000472585 CX3CR1P49238 355 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 ZNF121P58317 390 aaPredicted RBP7.5□□□□□ -1.21
VCL-204ENST00000472585 CD83Q01151 205 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 MZT1Q08AG7 82 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 MAPRE2Q15555 327 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 PLA1AQ53H76 456 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 TEX30Q5JUR7 227 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 CASC10Q5T4H9 136 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 LINC01590Q5TEZ4 76 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 TMEM200BQ69YZ2 307 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 GLYATQ6IB77 296 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 FAM57BQ71RH2 274 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 TMEM219Q86XT9 240 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 PROKR2Q8NFJ6 384 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 OR10Z1Q8NGY1 313 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 RP9Q8TA86 221 aaKnown RBP7.5□□□□□ -1.21
VCL-204ENST00000472585 MED30Q96HR3 178 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 YY1AP1Q9H869 796 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 FGFR1OP2Q9NVK5 253 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 DNAJC27Q9NZQ0 273 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 NLKQ9UBE8 527 aa7.5□□□□□ -1.21
VCL-204ENST00000472585 A0A1W2PQ09 198 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 A6NDX4 124 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 VGLL3A8MV65 326 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 H0YAE9 185 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 TIPRLO75663 272 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 GADD45GO95257 159 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 ANXA2P07355 339 aaKnown RBP7.49□□□□□ -1.21
VCL-204ENST00000472585 CCL3L1P16619 93 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 PAICSP22234 425 aaKnown RBP7.49□□□□□ -1.21
VCL-204ENST00000472585 GABRA2P47869 451 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 ENTPD1P49961 510 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 DLX6P56179 175 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 TSPAN31Q12999 210 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 PRDX4Q13162 271 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 BLMHQ13867 455 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 CRMP1Q14194 572 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 FAM185AQ8N0U4 392 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 CD177Q8N6Q3 437 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 RNF148Q8N7C7 305 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 OR4Q3Q8NH05 313 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 MUC7Q8TAX7 377 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 RNF133Q8WVZ7 376 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 RNF170Q96K19 258 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 HOPXQ9BPY8 73 aaPredicted RBP7.49□□□□□ -1.21
VCL-204ENST00000472585 KCTD14Q9BQ13 255 aaPredicted RBP7.49□□□□□ -1.21
VCL-204ENST00000472585 BTBD10Q9BSF8 475 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 ABHD6Q9BV23 337 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 CHID1Q9BWS9 393 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
VCL-204ENST00000472585 OR51I2Q9H344 312 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 OPA3Q9H6K4 179 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 ABCD2Q9UBJ2 740 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 AP3M1Q9Y2T2 418 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 V9GYQ6 96 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 RYR2Q92736 4967 aa7.49□□□□□ -1.21
VCL-204ENST00000472585 MEX3AA1L020 520 aaKnown RBP7.48□□□□□ -1.21
VCL-204ENST00000472585 NKX6-3A6NJ46 265 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 HMGB1P1B2RPK0 211 aaPredicted RBP7.48□□□□□ -1.21
VCL-204ENST00000472585 ZNF878C9JN71 531 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 CST4P01036 141 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 GASTP01350 101 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 SPI1P17947 270 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 GLRA1P23415 457 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 COX7A1P24310 79 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 OPRL1P41146 370 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 CEBPDP49716 269 aaPredicted RBP7.48□□□□□ -1.21
VCL-204ENST00000472585 SPIBQ01892 262 aa7.48□□□□□ -1.21
VCL-204ENST00000472585 EGFEM1PQ0D2K5 195 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms