RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZNF732B4DXR9 585 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 M0R233 179 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 SLC22A1O15245 554 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 ALX3O95076 343 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 IGHV1-46P01743 117 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 PRF1P14222 555 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 RAB3BP20337 219 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 RBMXP38159 391 aaKnown RBP16.31■□□□□ 0.2
PSPC1-203ENST00000471658 HNRNPA0Q13151 305 aaKnown RBP16.31■□□□□ 0.2
PSPC1-203ENST00000471658 MAB21L1Q13394 359 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 CNN3Q15417 329 aaKnown RBP16.31■□□□□ 0.2
PSPC1-203ENST00000471658 DDI2Q5TDH0 399 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 USP43Q70EL4 1123 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 WDR86Q86TI4 376 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 TMEM200AQ86VY9 491 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 OR5A2Q8NGI9 324 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 ELMOD3Q96FG2 381 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 SLC7A11Q9UPY5 501 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 LAMP3Q9UQV4 416 aa16.31■□□□□ 0.2
PSPC1-203ENST00000471658 PRKACBP22694 351 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 FUT6P51993 359 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 ZNF787Q6DD87 383 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 C11orf71Q6IPW1 123 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 ANGPTL5Q86XS5 388 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 LYPD6Q86Y78 171 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 BORCS8Q96FH0 119 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 MICU1Q9BPX6 476 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 FAM192AQ9GZU8 254 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 SLC22A4Q9H015 551 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 DYNLRB1Q9NP97 96 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 CYSLTR2Q9NS75 346 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 CBLN4Q9NTU7 201 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 CRYBG3Q68DQ2 2970 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 PQLC2LA1A4F0 135 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 C17orf100A8MU93 164 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 ZNF701M0R085 212 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-203ENST00000471658 IL1AP01583 271 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 ALDOBP05062 364 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 MTCP1P56278 107 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 AGAP6Q5VW22 663 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 DTX2Q86UW9 622 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 TPRA1Q86W33 373 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 JAGN1Q8N5M9 183 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 OR5D18Q8NGL1 313 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 SPSB1Q96BD6 273 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 TRAF4Q9BUZ4 470 aaPredicted RBP16.3■□□□□ 0.2
PSPC1-203ENST00000471658 BARHL1Q9BZE3 327 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 CXXC4Q9H2H0 198 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 V9GY05 133 aa16.3■□□□□ 0.2
PSPC1-203ENST00000471658 PDCD5O14737 125 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 MAGEB3O15480 346 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 GRPP07492 148 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 SNRPD2P62316 118 aaKnown RBP16.29■□□□□ 0.2
PSPC1-203ENST00000471658 KISS1Q15726 138 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 PRAMEF6Q5VXH4 476 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 CALHM1Q8IU99 346 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 TECTBQ96PL2 329 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 DCUN1D5Q9BTE7 237 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 RTL8AQ9BWD3 113 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 FAIMQ9NVQ4 179 aa16.29■□□□□ 0.2
PSPC1-203ENST00000471658 RAI1Q7Z5J4 1906 aaPredicted RBP16.29■□□□□ 0.2
PSPC1-203ENST00000471658 MEGF11A6BM72 1044 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 TRIM64BA6NI03 449 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 PLATP00750 562 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 CD37P11049 281 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 SLC2A2P11168 524 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-203ENST00000471658 ZNF93P35789 620 aaPredicted RBP16.28■□□□□ 0.2
PSPC1-203ENST00000471658 RBP2P50120 134 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 GNG3P63215 75 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 MPPED2Q15777 294 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 HES5Q5TA89 166 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 LHFPL2Q6ZUX7 228 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 ITLN1Q8WWA0 313 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 C14orf79Q96F83 325 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 OR2V2Q96R30 315 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 LIME1Q9H400 295 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 CNTD2Q9H8S5 307 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 ABCB9Q9NP78 766 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 ZDHHC8Q9ULC8 765 aa16.28■□□□□ 0.2
PSPC1-203ENST00000471658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-203ENST00000471658 ERCC1P07992 297 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-203ENST00000471658 ZNF182P17025 639 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-203ENST00000471658 OR3A4PP47883 348 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 ATP1B3P54709 279 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 CLDN12P56749 244 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 KRTAP10-9P60411 292 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 CCL8P80075 99 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 TNFAIP6P98066 277 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-203ENST00000471658 GLT8D1Q68CQ7 371 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 C1QL2Q7Z5L3 287 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 NRGNQ92686 78 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 MEGF10Q96KG7 1140 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 GPER1Q99527 375 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 VRK1Q99986 396 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-203ENST00000471658 OR51I2Q9H344 312 aa16.27■□□□□ 0.2
PSPC1-203ENST00000471658 METTL17Q9H7H0 456 aaPredicted RBP16.27■□□□□ 0.2
PSPC1-203ENST00000471658 A0A0B4J203 849 aa16.27■□□□□ 0.19
PSPC1-203ENST00000471658 OR5B21A6NL26 309 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms