RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 OPN5Q6U736 354 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 ZNF645Q8N7E2 425 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 ZNF433Q8N7K0 673 aaPredicted RBP4.41□□□□□ -1.7
SMC5-202ENST00000471372 OR8G5Q8NG78 346 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 OR6N1Q8NGY5 312 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 OR2AE1Q8NHA4 323 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 LRRC45Q96CN5 670 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 C18orf15Q96N68 181 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 CAMK2N2Q96S95 79 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 EMC6Q9BV81 110 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 ANGPTL4Q9BY76 406 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 SRRQ9GZT4 340 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 OR52D1Q9H346 318 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 SLC38A10Q9HBR0 1119 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 SNX24Q9Y343 169 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 ORC6Q9Y5N6 252 aa4.41□□□□□ -1.7
SMC5-202ENST00000471372 IGKV6D-21A0A0A0MT36 114 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 ISPDA4D126 451 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 ZNF705GA8MUZ8 300 aaPredicted RBP4.4□□□□□ -1.71
SMC5-202ENST00000471372 CDIPTO14735 213 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 ADRB3P13945 408 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 APLNRP35414 380 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 PRKCDQ05655 676 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 PNOCQ13519 176 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 CDNFQ49AH0 187 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 SYT6Q5T7P8 510 aaPredicted RBP4.4□□□□□ -1.71
SMC5-202ENST00000471372 OR1S1Q8NH92 325 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 SFXN5Q8TD22 340 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 EXOSC8Q96B26 276 aaKnown RBP4.4□□□□□ -1.71
SMC5-202ENST00000471372 OR4K3Q96R72 315 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 SFXN3Q9BWM7 321 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 GGTLC1Q9BX51 225 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 ZNF331Q9NQX6 463 aaPredicted RBP4.4□□□□□ -1.71
SMC5-202ENST00000471372 NLE1Q9NVX2 485 aaPredicted RBP4.4□□□□□ -1.71
SMC5-202ENST00000471372 ANXA10Q9UJ72 324 aa4.4□□□□□ -1.71
SMC5-202ENST00000471372 ADAMTS13Q76LX8 1427 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 A0A0U1RQV1 116 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 TRIM49D1C9J1S8 452 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 CLDN34H7C241 214 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 CD40LGP29965 261 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 PCK1P35558 622 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 TUFMP49411 452 aaKnown RBP4.39□□□□□ -1.71
SMC5-202ENST00000471372 AQP5P55064 265 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 OR10A3P58181 314 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 NAB1Q13506 487 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 TRAM1Q15629 374 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 SMUG1Q53HV7 270 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 HHATQ5VTY9 493 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 WDFY1Q8IWB7 410 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 DRAM1Q8N682 238 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 ZNF738Q8NE65 137 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 OR1J4Q8NGS1 313 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 OR5W2Q8NH69 310 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 COQ8AQ8NI60 647 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 DCAKDQ8WVC6 231 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 RORBQ92753 470 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 SMARCD1Q96GM5 515 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 ARL5BQ96KC2 179 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 ZIM3Q96PE6 472 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 ALS2CR12Q96Q35 445 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 TMED9Q9BVK6 235 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 FGF23Q9GZV9 251 aaPredicted RBP4.39□□□□□ -1.71
SMC5-202ENST00000471372 OR12D3Q9UGF7 316 aa4.39□□□□□ -1.71
SMC5-202ENST00000471372 PUS1Q9Y606 427 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMC5-202ENST00000471372 GPATCH8Q9UKJ3 1502 aaKnown RBP4.39□□□□□ -1.71
SMC5-202ENST00000471372 ZNF233A6NK53 670 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 RSPH10B2B2RC85 870 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 F8VZ95 297 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 M0R1X1 148 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 MANBAO00462 879 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 TAAR5O14804 337 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 RSPH10BP0C881 870 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 ZNF823P16415 610 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 FLOT2Q14254 428 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 SHHQ15465 462 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 HBMQ6B0K9 141 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 BHLHA15Q7RTS1 189 aaPredicted RBP4.38□□□□□ -1.71
SMC5-202ENST00000471372 CRLF3Q8IUI8 442 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 RNASEH2CQ8TDP1 164 aaKnown RBP4.38□□□□□ -1.71
SMC5-202ENST00000471372 RNF138Q8WVD3 245 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 FLYWCH2Q96CP2 140 aaKnown RBP4.38□□□□□ -1.71
SMC5-202ENST00000471372 PDXPQ96GD0 296 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 ZNF251Q9BRH9 671 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 HDHD2Q9H0R4 259 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 WDR55Q9H6Y2 383 aaPredicted RBP4.38□□□□□ -1.71
SMC5-202ENST00000471372 C12orf4Q9NQ89 552 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 UBAP1Q9NZ09 502 aa4.38□□□□□ -1.71
SMC5-202ENST00000471372 A0A096LNJ9 63 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 IGHV1OR15-9A0A0B4J2B8 117 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 C1orf232A0A0U1RR37 186 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 KIR2DS1A0A191URI9 304 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 C5orf63A6NC05 138 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 FABP12A6NFH5 140 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 TMX2-CTNND1H3BSU7 103 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 NDUFS5O43920 106 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 DRD3P35462 400 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 ANP32AP39687 249 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms