RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CBR3O75828 277 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 OR7A10O76100 309 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 OR5F1O95221 314 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GADD45GO95257 159 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SNAP29O95721 258 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GUSBP08236 651 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 ADRA2AP08913 450 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 QDPRP09417 244 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GNAO1P09471 354 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CLUP10909 449 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 PNMTP11086 282 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GP9P14770 177 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF708P17019 499 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 PGCP20142 388 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 BCL3P20749 454 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CXCR1P25024 350 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 MAGEA8P43361 318 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 POLR2HP52434 150 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 RIDAP52758 137 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 AQP4P55087 323 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 BTG1P62324 171 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 ERVK-25P63136 954 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 MYBPC1Q00872 1141 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 FMODQ06828 376 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 KLRB1Q12918 225 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GNA13Q14344 377 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SLC10A1Q14973 349 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 TRAM2Q15035 370 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 PON3Q15166 354 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 TRIP10Q15642 601 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 C6orf52Q5T4I8 152 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 C9orf135Q5VTT2 229 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 C1orf140Q5VVS0 124 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CARD17Q5XLA6 110 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 MBOAT2Q6ZWT7 520 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 PIWIL3Q7Z3Z3 882 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 NUFIP2Q7Z417 695 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CEACAM19Q7Z692 300 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 RANBP3LQ86VV4 465 aaPredicted RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SLC22A16Q86VW1 577 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SLC30A8Q8IWU4 369 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 C10orf67Q8IYJ2 551 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GTPBP8Q8N3Z3 284 aaPredicted RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 LRRC75AQ8NAA5 344 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CSNK1G2-AS1Q8NCQ2 148 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 Q8NFD4 153 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 BBS1Q8NFJ9 593 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 NEIL3Q8TAT5 605 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM239Q8WW34 195 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 LZICQ8WZA0 190 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 OSTF1Q92882 214 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SLC38A4Q969I6 547 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 DUS3LQ96G46 650 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SAMD8Q96LT4 415 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 TSSK2Q96PF2 358 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 SECISBP2Q96T21 854 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF426Q9BUY5 554 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 RIBC2Q9H4K1 309 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 REEP1Q9H902 201 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 MED29Q9NX70 200 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 KLHL28Q9NXS3 571 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 TAS2R5Q9NYW4 299 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 RPS6KB2Q9UBS0 482 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 DNAJB9Q9UBS3 223 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CHRNA9Q9UGM1 479 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 AP3M1Q9Y2T2 418 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 AUP1Q9Y679 476 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CRYBG3Q68DQ2 2970 aa3.15□□□□□ -1.9
COL9A1-206ENST00000470652 TRGV8A0A0C4DH27 118 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 A0A1W2PRQ8 180 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FAM183AA6NL82 134 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF716A6NP11 495 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 EFCAB9A8MZ26 197 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 G3V2T6 193 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SULT2B1O00204 365 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 DCTN6O00399 190 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FAAHO00519 579 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 GNGT2O14610 69 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SIGLEC5O15389 551 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FMO6PO60774 539 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 SLC19A2O60779 497 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 UPK3AO75631 287 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 CCNB2O95067 398 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 MPZL1O95297 269 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 AHSA1O95433 338 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 IFNA14P01570 189 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 IGHG3P01860 377 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 GYPBP06028 91 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ASAH2BP0C7U1 165 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 UMPSP11172 480 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF17P17021 662 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 AHCYP23526 432 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FASP25445 335 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 LCN1P31025 176 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FCGR2BP31994 310 aaPredicted RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 FCGR2CP31995 323 aa3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RBMXP38159 391 aaKnown RBP3.15□□□□□ -1.91
COL9A1-206ENST00000470652 RPS27P42677 84 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms