RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 FAM57AQ8TBR7 257 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 OR8B2Q96RD0 313 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 TMEM38AQ9H6F2 299 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 TMEM38BQ9NVV0 291 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 MPDZO75970 2070 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 ELP1O95163 1332 aa0.15□□□□□ -2.38
SSB-208ENST00000468600 IGHV6-1A0A0B4J1U7 121 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 A0A0B4J2C4 111 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 LSM8O95777 96 aaKnown RBP0.15□□□□□ -2.39
SSB-208ENST00000468600 OPN1SWP03999 348 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 PSG4Q00888 419 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 OR2V1Q8NHB1 315 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 CAPSLQ8WWF8 208 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 SMARCD1Q96GM5 515 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 DNAJC30Q96LL9 226 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 TMEM165Q9HC07 324 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 TREX1Q9NSU2 369 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 SLC17A4Q9Y2C5 497 aa0.15□□□□□ -2.39
SSB-208ENST00000468600 SYNE2Q8WXH0 6885 aaKnown RBP0.14□□□□□ -2.39
SSB-208ENST00000468600 MDC1Q14676 2089 aaKnown RBP0.14□□□□□ -2.39
SSB-208ENST00000468600 TRBV9A0A0B4J1U6 114 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 H3BRN7 92 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 NME4O00746 187 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 SLC16A7O60669 478 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 CRTAPO75718 401 aaPredicted RBP0.14□□□□□ -2.39
SSB-208ENST00000468600 NAPSAO96009 420 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 TRGV3P03979 118 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 SEC11BP0C7V7 166 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 UQCRFS1P47985 274 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 EMP2P54851 167 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 GPM6BQ13491 265 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 CST6Q15828 149 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 LINC00303Q3SY05 128 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 TMEM176BQ3YBM2 270 aaPredicted RBP0.14□□□□□ -2.39
SSB-208ENST00000468600 LRRC23Q53EV4 343 aaPredicted RBP0.14□□□□□ -2.39
SSB-208ENST00000468600 Q6ZRU5 148 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 C2orf73Q8N5S3 287 aaPredicted RBP0.14□□□□□ -2.39
SSB-208ENST00000468600 OR8J1Q8NGP2 316 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 RDH12Q96NR8 316 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 HEBP1Q9NRV9 189 aa0.14□□□□□ -2.39
SSB-208ENST00000468600 SMCO2A6NFE2 343 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 ERICH4A6NGS2 130 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 H0YCG3 227 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 CLOCKO15516 846 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 CXorf1O96002 111 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 ZNF22P17026 224 aaPredicted RBP0.13□□□□□ -2.39
SSB-208ENST00000468600 CXCR1P25024 350 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 SLC6A1P30531 599 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 BST1Q10588 318 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 RNASEKQ6P5S7 137 aaKnown RBP0.13□□□□□ -2.39
SSB-208ENST00000468600 TTC23LQ6PF05 361 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 SLC16A14Q7RTX9 510 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 LYZL2Q7Z4W2 148 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 HORMAD1Q86X24 394 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 MSRB3Q8IXL7 192 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 AMN1Q8IY45 258 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 OR7G2Q8NG99 324 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 LYPD6BQ8NI32 183 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 FXYD5Q96DB9 178 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 PPP1R36Q96LQ0 422 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 GON7Q9BXV9 100 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 ZNF160Q9HCG1 818 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 ABCB9Q9NP78 766 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 CLN6Q9NWW5 311 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 ZNF257Q9Y2Q1 563 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 FADS3Q9Y5Q0 445 aa0.13□□□□□ -2.39
SSB-208ENST00000468600 ANKRD65E5RJM6 399 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 BLVRBP30043 206 aaPredicted RBP0.12□□□□□ -2.39
SSB-208ENST00000468600 G6PCP35575 357 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 SLC1A2P43004 574 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 IL24Q13007 206 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 C22orf42Q6IC83 251 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 SLC8B1Q6J4K2 584 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 ZDHHC22Q8N966 263 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 OR8A1Q8NGG7 326 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 ACMSDQ8TDX5 336 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 RPEQ96AT9 228 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 ISG20Q96AZ6 181 aaKnown RBP0.12□□□□□ -2.39
SSB-208ENST00000468600 RNF170Q96K19 258 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 FAM19A4Q96LR4 140 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 UQCC2Q9BRT2 126 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 THTPAQ9BU02 230 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 SLC7A11Q9UPY5 501 aa0.12□□□□□ -2.39
SSB-208ENST00000468600 ATG2BQ96BY7 2078 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 IGKV1D-37A0A075B6S9 117 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 LEUTXA8MZ59 168 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 SERPINA3P01011 423 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 IGKV1D-33P01593 117 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 IGKV1-33P01594 117 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 HBE1P02100 147 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 GZMBP10144 247 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 RRM2P31350 389 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 RAB10P61026 200 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 GRB2P62993 217 aaKnown RBP0.11□□□□□ -2.39
SSB-208ENST00000468600 HSP90AB3PQ58FF7 597 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 PRAMEF5Q5TYX0 476 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 PRAMEF6Q5VXH4 476 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 CLEC18BQ6UXF7 455 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 CYHR1Q6ZMK1 362 aa0.11□□□□□ -2.39
SSB-208ENST00000468600 SLC22A9Q8IVM8 553 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms